Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 HLA-K-203ENST00000430151 1046 ntBASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 EIF3FP3-201ENST00000434851 1086 ntBASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 AL033527.4-201ENST00000641026 673 ntBASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 AC112693.3-201ENST00000624819 1983 ntBASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.58□□□□□ -0.4
SSBP3Q9BWW4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 AC138035.3-201ENST00000622706 2791 ntBASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 MIR1202-201ENST00000408529 83 ntBASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 FAM45BP-202ENST00000592932 1624 ntBASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 AC023024.2-201ENST00000623561 1993 ntBASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 AL157414.3-201ENST00000624276 1954 ntBASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP3Q9BWW4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms