Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDND2Q8NHS1 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 MROH4P-201ENST00000431302 1578 ntBASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 RNU1-114P-201ENST00000365297 166 ntBASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 FAM197Y7-201ENST00000432892 766 ntBASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDND2Q8NHS1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 FGD5P1-202ENST00000614866 2498 ntBASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 AC105250.1-201ENST00000509378 2057 ntBASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.81□□□□□ -0.36
CLDND2Q8NHS1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms