Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 DOC2GP-202ENST00000514950 1163 ntBASIC16.32■□□□□ 0.2
CCDC172P0C7W6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 AC107373.2-201ENST00000607735 490 ntBASIC16.32■□□□□ 0.2
CCDC172P0C7W6 AC139530.3-201ENST00000620344 690 ntBASIC16.32■□□□□ 0.2
CCDC172P0C7W6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 AC018665.1-201ENST00000622927 1362 ntBASIC16.32■□□□□ 0.2
CCDC172P0C7W6 AC004840.1-201ENST00000636359 365 ntBASIC16.32■□□□□ 0.2
CCDC172P0C7W6 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 AC117489.1-201ENST00000625169 3217 ntBASIC16.32■□□□□ 0.2
CCDC172P0C7W6 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CCDC172P0C7W6 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.31■□□□□ 0.2
CCDC172P0C7W6 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 AL589987.1-201ENST00000453380 819 ntBASIC16.31■□□□□ 0.2
CCDC172P0C7W6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 CICP8-201ENST00000455800 2813 ntBASIC16.31■□□□□ 0.2
CCDC172P0C7W6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC172P0C7W6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms