Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC11.33□□□□□ -0.6
SNAI2O43623 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SNAI2O43623 AL662844.1-201ENST00000546340 181 ntBASIC11.33□□□□□ -0.6
SNAI2O43623 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
SNAI2O43623 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.33□□□□□ -0.6
SNAI2O43623 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC11.33□□□□□ -0.6
SNAI2O43623 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.33□□□□□ -0.6
SNAI2O43623 RN7SL510P-201ENST00000581311 263 ntBASIC11.33□□□□□ -0.6
SNAI2O43623 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SNAI2O43623 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SNAI2O43623 AL513190.1-201ENST00000621254 727 ntBASIC11.33□□□□□ -0.6
SNAI2O43623 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SNAI2O43623 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
SNAI2O43623 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.33□□□□□ -0.6
SNAI2O43623 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SNAI2O43623 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
SNAI2O43623 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SNAI2O43623 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SNAI2O43623 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
SNAI2O43623 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SNAI2O43623 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.33□□□□□ -0.6
SNAI2O43623 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.33□□□□□ -0.6
SNAI2O43623 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SNAI2O43623 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SNAI2O43623 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.33□□□□□ -0.6
SNAI2O43623 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
SNAI2O43623 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SNAI2O43623 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SNAI2O43623 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SNAI2O43623 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.32□□□□□ -0.6
SNAI2O43623 AC012508.2-201ENST00000567613 1472 ntBASIC11.32□□□□□ -0.6
SNAI2O43623 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SNAI2O43623 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.32□□□□□ -0.6
SNAI2O43623 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.32□□□□□ -0.6
SNAI2O43623 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
SNAI2O43623 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
SNAI2O43623 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
SNAI2O43623 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
SNAI2O43623 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
SNAI2O43623 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SNAI2O43623 MRPL3P1-201ENST00000400109 1033 ntBASIC11.32□□□□□ -0.6
SNAI2O43623 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.32□□□□□ -0.6
SNAI2O43623 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.32□□□□□ -0.6
SNAI2O43623 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.32□□□□□ -0.6
SNAI2O43623 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.32□□□□□ -0.6
SNAI2O43623 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 AC243562.1-201ENST00000560672 389 ntBASIC11.32□□□□□ -0.6
SNAI2O43623 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 LINC01225-203ENST00000563550 1244 ntBASIC11.32□□□□□ -0.6
SNAI2O43623 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.32□□□□□ -0.6
SNAI2O43623 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC11.32□□□□□ -0.6
SNAI2O43623 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.32□□□□□ -0.6
SNAI2O43623 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC11.32□□□□□ -0.6
SNAI2O43623 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 CTBP1-AS2-206ENST00000581398 5652 ntBASIC11.32□□□□□ -0.6
SNAI2O43623 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 AC104109.2-201ENST00000602919 1418 ntBASIC11.32□□□□□ -0.6
SNAI2O43623 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 NUTM2HP-201ENST00000442076 2498 ntBASIC11.32□□□□□ -0.6
SNAI2O43623 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.32□□□□□ -0.6
SNAI2O43623 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.32□□□□□ -0.6
SNAI2O43623 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SNAI2O43623 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.32□□□□□ -0.6
SNAI2O43623 AP3S2-216ENST00000617003 1561 ntBASIC11.32□□□□□ -0.6
SNAI2O43623 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.32□□□□□ -0.6
SNAI2O43623 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SNAI2O43623 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.32□□□□□ -0.6
SNAI2O43623 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
SNAI2O43623 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.32□□□□□ -0.6
SNAI2O43623 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
SNAI2O43623 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SNAI2O43623 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SNAI2O43623 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SNAI2O43623 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SNAI2O43623 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SNAI2O43623 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms