Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.75□□□□□ -0.37
TSPAN4O14817 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.75□□□□□ -0.37
TSPAN4O14817 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.75□□□□□ -0.37
TSPAN4O14817 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.75□□□□□ -0.37
TSPAN4O14817 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.75□□□□□ -0.37
TSPAN4O14817 AC005412.3-201ENST00000580309 715 ntBASIC12.75□□□□□ -0.37
TSPAN4O14817 AC073957.3-201ENST00000609998 6758 ntBASIC12.75□□□□□ -0.37
TSPAN4O14817 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.75□□□□□ -0.37
TSPAN4O14817 FAM197Y3-203ENST00000618346 717 ntBASIC12.75□□□□□ -0.37
TSPAN4O14817 REXO1L3P-201ENST00000622202 1288 ntBASIC12.75□□□□□ -0.37
TSPAN4O14817 MAPK10-262ENST00000641051 5738 ntBASIC12.75□□□□□ -0.37
TSPAN4O14817 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TSPAN4O14817 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TSPAN4O14817 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
TSPAN4O14817 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TSPAN4O14817 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TSPAN4O14817 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TSPAN4O14817 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TSPAN4O14817 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TSPAN4O14817 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
TSPAN4O14817 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
TSPAN4O14817 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TSPAN4O14817 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.74□□□□□ -0.37
TSPAN4O14817 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 MTHFR-210ENST00000641407 2387 ntBASIC12.74□□□□□ -0.37
TSPAN4O14817 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
TSPAN4O14817 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
TSPAN4O14817 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.74□□□□□ -0.37
TSPAN4O14817 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
TSPAN4O14817 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
TSPAN4O14817 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TSPAN4O14817 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.74□□□□□ -0.37
TSPAN4O14817 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.74□□□□□ -0.37
TSPAN4O14817 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
TSPAN4O14817 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
TSPAN4O14817 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TSPAN4O14817 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
TSPAN4O14817 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
TSPAN4O14817 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
TSPAN4O14817 PMS2P1-201ENST00000431037 1228 ntBASIC12.74□□□□□ -0.37
TSPAN4O14817 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 HCG4B-203ENST00000450128 991 ntBASIC12.74□□□□□ -0.37
TSPAN4O14817 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.74□□□□□ -0.37
TSPAN4O14817 CXCL1P1-201ENST00000502804 216 ntBASIC12.74□□□□□ -0.37
TSPAN4O14817 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.74□□□□□ -0.37
TSPAN4O14817 AC091167.2-201ENST00000579581 588 ntBASIC12.74□□□□□ -0.37
TSPAN4O14817 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.74□□□□□ -0.37
TSPAN4O14817 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.74□□□□□ -0.37
TSPAN4O14817 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.74□□□□□ -0.37
TSPAN4O14817 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.74□□□□□ -0.37
TSPAN4O14817 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.74□□□□□ -0.37
TSPAN4O14817 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.74□□□□□ -0.37
TSPAN4O14817 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TSPAN4O14817 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.74□□□□□ -0.37
TSPAN4O14817 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.74□□□□□ -0.37
TSPAN4O14817 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TSPAN4O14817 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TSPAN4O14817 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.73□□□□□ -0.37
TSPAN4O14817 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TSPAN4O14817 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TSPAN4O14817 AL353732.1-201ENST00000569618 1459 ntBASIC12.73□□□□□ -0.37
TSPAN4O14817 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TSPAN4O14817 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TSPAN4O14817 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TSPAN4O14817 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TSPAN4O14817 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TSPAN4O14817 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TSPAN4O14817 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.73□□□□□ -0.37
TSPAN4O14817 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
TSPAN4O14817 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms