Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 FDX1P1-201ENST00000449115 551 ntBASIC13.78□□□□□ -0.2
CLN6Q9NWW5 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLN6Q9NWW5 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.77□□□□□ -0.2
CLN6Q9NWW5 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLN6Q9NWW5 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
CLN6Q9NWW5 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLN6Q9NWW5 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CLN6Q9NWW5 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
CLN6Q9NWW5 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 KRT8P12-202ENST00000472924 1397 ntBASIC13.77□□□□□ -0.21
CLN6Q9NWW5 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN6Q9NWW5 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms