Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 MRPL3P1-201ENST00000400109 1033 ntBASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 RNA5SP419-201ENST00000515908 135 ntBASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC10.14□□□□□ -0.79
SND1-IT1Q9HBX3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 AC012508.2-201ENST00000567613 1472 ntBASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 TPT1P11-201ENST00000458482 498 ntBASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 PENK-208ENST00000523051 772 ntTSL 5 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 AC034105.1-201ENST00000563488 319 ntBASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 AC145285.3-201ENST00000564603 959 ntBASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 AP000842.3-202ENST00000569238 1080 ntBASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 AC104692.2-201ENST00000603054 253 ntBASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 COL6A4P2-202ENST00000504443 2753 ntBASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC10.13□□□□□ -0.79
SND1-IT1Q9HBX3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
SND1-IT1Q9HBX3 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms