Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 AC104982.3-201ENST00000581995 514 ntBASIC13.42□□□□□ -0.26
RNF138Q8WVD3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 AP001267.2-201ENST00000532619 2086 ntBASIC13.42□□□□□ -0.26
RNF138Q8WVD3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 TMBIM7P-202ENST00000641474 1516 ntBASIC13.42□□□□□ -0.26
RNF138Q8WVD3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 KRT8P29-201ENST00000420409 1371 ntBASIC13.42□□□□□ -0.26
RNF138Q8WVD3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.42□□□□□ -0.26
RNF138Q8WVD3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF138Q8WVD3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 AC090505.1-201ENST00000430515 1834 ntBASIC13.41□□□□□ -0.26
RNF138Q8WVD3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 LINC00552-201ENST00000625151 2579 ntBASIC13.41□□□□□ -0.26
RNF138Q8WVD3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 AC100827.2-201ENST00000563214 1194 ntBASIC13.41□□□□□ -0.26
RNF138Q8WVD3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 MIR6869-201ENST00000619434 62 ntBASIC13.41□□□□□ -0.26
RNF138Q8WVD3 AL008638.5-201ENST00000623814 1298 ntBASIC13.41□□□□□ -0.26
RNF138Q8WVD3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 AC215219.1-201ENST00000400706 1817 ntBASIC13.41□□□□□ -0.26
RNF138Q8WVD3 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RNF138Q8WVD3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 AL008718.2-201ENST00000609206 1313 ntBASIC13.4□□□□□ -0.26
RNF138Q8WVD3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms