Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 AC243562.2-201ENST00000561247 970 ntBASIC13.24□□□□□ -0.29
C11orf88Q6PI97 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 AL096865.1-201ENST00000606796 927 ntBASIC13.24□□□□□ -0.29
C11orf88Q6PI97 AP001059.3-201ENST00000619053 235 ntBASIC13.24□□□□□ -0.29
C11orf88Q6PI97 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 MBLAC2-202ENST00000514906 1936 ntBASIC13.23□□□□□ -0.29
C11orf88Q6PI97 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 LINC02084-201ENST00000606069 1096 ntBASIC13.23□□□□□ -0.29
C11orf88Q6PI97 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 AC090114.2-201ENST00000608477 7054 ntBASIC13.23□□□□□ -0.29
C11orf88Q6PI97 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf88Q6PI97 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms