Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 AC004840.1-201ENST00000636359 365 ntBASIC15.41■□□□□ 0.06
CASC4Q6P4E1 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 DMBT1P1-203ENST00000636837 4628 ntBASIC15.41■□□□□ 0.06
CASC4Q6P4E1 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CASC4Q6P4E1 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 FAM86LP-201ENST00000478302 853 ntBASIC15.4■□□□□ 0.06
CASC4Q6P4E1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 PTENP1-202ENST00000532280 3996 ntBASIC15.4■□□□□ 0.06
CASC4Q6P4E1 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.4■□□□□ 0.06
CASC4Q6P4E1 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASC4Q6P4E1 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
CASC4Q6P4E1 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CASC4Q6P4E1 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASC4Q6P4E1 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CASC4Q6P4E1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASC4Q6P4E1 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CASC4Q6P4E1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CASC4Q6P4E1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASC4Q6P4E1 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASC4Q6P4E1 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.39■□□□□ 0.05
CASC4Q6P4E1 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.39■□□□□ 0.05
CASC4Q6P4E1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASC4Q6P4E1 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CASC4Q6P4E1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CASC4Q6P4E1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms