Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 AC007326.2-201ENST00000624224 7579 ntBASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 MIR6842-201ENST00000612539 65 ntBASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 COX6A1P2-201ENST00000620597 330 ntBASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 AC133540.1-201ENST00000620845 1019 ntBASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 FAM90A2P-201ENST00000511144 1395 ntBASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 FAM90A25P-201ENST00000528404 1395 ntBASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 CAP2P1-201ENST00000557743 1390 ntBASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM71Q2Q1W2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM71Q2Q1W2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.21■□□□□ 0.18
TRIM71Q2Q1W2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM71Q2Q1W2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM71Q2Q1W2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM71Q2Q1W2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM71Q2Q1W2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM71Q2Q1W2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM71Q2Q1W2 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 AC068587.6-202ENST00000641839 5619 ntBASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 AC126365.1-201ENST00000578585 1514 ntBASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 KRT18P36-201ENST00000411618 1276 ntBASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 AC026320.2-201ENST00000434379 478 ntBASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 XBP1P1-201ENST00000436573 652 ntBASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 AC078991.1-201ENST00000437297 610 ntBASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 PHBP15-201ENST00000574228 665 ntBASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 RN7SL736P-201ENST00000613111 269 ntBASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM71Q2Q1W2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms