Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC10.78□□□□□ -0.68
UBE2D3P61077 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
UBE2D3P61077 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC10.77□□□□□ -0.68
UBE2D3P61077 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D3P61077 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D3P61077 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D3P61077 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D3P61077 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
UBE2D3P61077 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC10.77□□□□□ -0.68
UBE2D3P61077 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D3P61077 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D3P61077 USP35-204ENST00000530267 2419 ntTSL 2 BASIC10.77□□□□□ -0.68
UBE2D3P61077 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D3P61077 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D3P61077 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.77□□□□□ -0.68
UBE2D3P61077 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
UBE2D3P61077 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 AL591122.2-201ENST00000624125 1853 ntBASIC10.77□□□□□ -0.69
UBE2D3P61077 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
UBE2D3P61077 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC10.77□□□□□ -0.69
UBE2D3P61077 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC10.77□□□□□ -0.69
UBE2D3P61077 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
UBE2D3P61077 KRT18P13-201ENST00000400056 1290 ntBASIC10.77□□□□□ -0.69
UBE2D3P61077 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC10.77□□□□□ -0.69
UBE2D3P61077 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC10.77□□□□□ -0.69
UBE2D3P61077 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC10.77□□□□□ -0.69
UBE2D3P61077 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.77□□□□□ -0.69
UBE2D3P61077 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
UBE2D3P61077 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC10.77□□□□□ -0.69
UBE2D3P61077 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC10.77□□□□□ -0.69
UBE2D3P61077 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 AC044860.1-202ENST00000559481 777 ntBASIC10.77□□□□□ -0.69
UBE2D3P61077 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC10.77□□□□□ -0.69
UBE2D3P61077 SSH2-210ENST00000582084 560 ntTSL 3 BASIC10.77□□□□□ -0.69
UBE2D3P61077 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC10.77□□□□□ -0.69
UBE2D3P61077 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC10.77□□□□□ -0.69
UBE2D3P61077 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC10.77□□□□□ -0.69
UBE2D3P61077 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC10.77□□□□□ -0.69
UBE2D3P61077 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
UBE2D3P61077 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
UBE2D3P61077 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC10.77□□□□□ -0.69
UBE2D3P61077 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
UBE2D3P61077 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D3P61077 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
UBE2D3P61077 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC10.76□□□□□ -0.69
UBE2D3P61077 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC10.76□□□□□ -0.69
UBE2D3P61077 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
UBE2D3P61077 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC10.76□□□□□ -0.69
UBE2D3P61077 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC10.76□□□□□ -0.69
UBE2D3P61077 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC10.76□□□□□ -0.69
UBE2D3P61077 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
UBE2D3P61077 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC10.76□□□□□ -0.69
UBE2D3P61077 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 HNRNPA3P1-201ENST00000401429 1139 ntBASIC10.76□□□□□ -0.69
UBE2D3P61077 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms