Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 AC104596.2-201ENST00000512793 793 ntBASIC13.36□□□□□ -0.27
SLC25A1P53007 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SLC25A1P53007 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC25A1P53007 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.36□□□□□ -0.27
SLC25A1P53007 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC25A1P53007 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SLC25A1P53007 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.36□□□□□ -0.27
SLC25A1P53007 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.36□□□□□ -0.27
SLC25A1P53007 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC25A1P53007 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC25A1P53007 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC25A1P53007 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLC25A1P53007 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLC25A1P53007 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLC25A1P53007 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC25A1P53007 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SLC25A1P53007 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC25A1P53007 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.36□□□□□ -0.27
SLC25A1P53007 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SLC25A1P53007 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC25A1P53007 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SLC25A1P53007 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLC25A1P53007 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC25A1P53007 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC25A1P53007 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SLC25A1P53007 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC25A1P53007 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.36□□□□□ -0.27
SLC25A1P53007 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.36□□□□□ -0.27
SLC25A1P53007 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC25A1P53007 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.36□□□□□ -0.27
SLC25A1P53007 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SLC25A1P53007 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLC25A1P53007 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SLC25A1P53007 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
SLC25A1P53007 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
SLC25A1P53007 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
SLC25A1P53007 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.35□□□□□ -0.27
SLC25A1P53007 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SLC25A1P53007 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 AC090505.1-201ENST00000430515 1834 ntBASIC13.35□□□□□ -0.27
SLC25A1P53007 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.35□□□□□ -0.27
SLC25A1P53007 BASP1P1-201ENST00000430708 665 ntBASIC13.35□□□□□ -0.27
SLC25A1P53007 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 AC007969.1-201ENST00000433675 447 ntBASIC13.35□□□□□ -0.27
SLC25A1P53007 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.35□□□□□ -0.27
SLC25A1P53007 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.35□□□□□ -0.27
SLC25A1P53007 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.35□□□□□ -0.27
SLC25A1P53007 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.35□□□□□ -0.27
SLC25A1P53007 AC055876.2-201ENST00000531834 546 ntBASIC13.35□□□□□ -0.27
SLC25A1P53007 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.35□□□□□ -0.27
SLC25A1P53007 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 AC124283.3-201ENST00000570869 594 ntBASIC13.35□□□□□ -0.27
SLC25A1P53007 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.35□□□□□ -0.27
SLC25A1P53007 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SLC25A1P53007 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.35□□□□□ -0.27
SLC25A1P53007 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SLC25A1P53007 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.35□□□□□ -0.27
SLC25A1P53007 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.35□□□□□ -0.27
SLC25A1P53007 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
SLC25A1P53007 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
SLC25A1P53007 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
SLC25A1P53007 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.35□□□□□ -0.27
SLC25A1P53007 AC104581.4-201ENST00000623126 3052 ntBASIC13.35□□□□□ -0.27
SLC25A1P53007 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.35□□□□□ -0.27
SLC25A1P53007 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SLC25A1P53007 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SLC25A1P53007 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.35□□□□□ -0.27
SLC25A1P53007 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.35□□□□□ -0.27
SLC25A1P53007 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SLC25A1P53007 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.35□□□□□ -0.27
SLC25A1P53007 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms