Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CENPFP49454 AC021305.1-201ENST00000520656 1514 ntBASIC16.47■□□□□ 0.23
CENPFP49454 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CENPFP49454 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.47■□□□□ 0.23
CENPFP49454 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.47■□□□□ 0.23
CENPFP49454 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CENPFP49454 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CENPFP49454 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CENPFP49454 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CENPFP49454 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CENPFP49454 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CENPFP49454 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CENPFP49454 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CENPFP49454 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CENPFP49454 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CENPFP49454 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CENPFP49454 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CENPFP49454 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC16.47■□□□□ 0.23
CENPFP49454 FAM86B3P-203ENST00000523992 854 ntBASIC16.47■□□□□ 0.23
CENPFP49454 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CENPFP49454 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC16.47■□□□□ 0.23
CENPFP49454 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC16.47■□□□□ 0.23
CENPFP49454 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC16.47■□□□□ 0.23
CENPFP49454 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC16.47■□□□□ 0.23
CENPFP49454 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CENPFP49454 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.47■□□□□ 0.23
CENPFP49454 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CENPFP49454 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CENPFP49454 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CENPFP49454 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CENPFP49454 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.47■□□□□ 0.23
CENPFP49454 MIR1301-201ENST00000408518 82 ntBASIC16.47■□□□□ 0.23
CENPFP49454 ACTG1P19-201ENST00000418987 1116 ntBASIC16.47■□□□□ 0.23
CENPFP49454 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CENPFP49454 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.47■□□□□ 0.23
CENPFP49454 AC092612.1-201ENST00000514501 998 ntBASIC16.47■□□□□ 0.23
CENPFP49454 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC16.47■□□□□ 0.23
CENPFP49454 RN7SL665P-201ENST00000578793 300 ntBASIC16.47■□□□□ 0.23
CENPFP49454 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CENPFP49454 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CENPFP49454 AL590440.2-201ENST00000641973 1595 ntBASIC16.46■□□□□ 0.23
CENPFP49454 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.46■□□□□ 0.23
CENPFP49454 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.46■□□□□ 0.23
CENPFP49454 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.46■□□□□ 0.23
CENPFP49454 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.46■□□□□ 0.23
CENPFP49454 IGHV1-12-201ENST00000518307 205 ntBASIC16.46■□□□□ 0.23
CENPFP49454 AL590235.1-201ENST00000564650 861 ntBASIC16.46■□□□□ 0.23
CENPFP49454 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC16.46■□□□□ 0.23
CENPFP49454 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CENPFP49454 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CENPFP49454 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.46■□□□□ 0.23
CENPFP49454 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CENPFP49454 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CENPFP49454 SSR4P1-203ENST00000599569 2260 ntBASIC16.46■□□□□ 0.23
CENPFP49454 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CENPFP49454 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CENPFP49454 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.46■□□□□ 0.23
CENPFP49454 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC16.46■□□□□ 0.23
CENPFP49454 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CENPFP49454 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CENPFP49454 AC112693.3-201ENST00000624819 1983 ntBASIC16.46■□□□□ 0.23
CENPFP49454 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CENPFP49454 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.46■□□□□ 0.22
CENPFP49454 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CENPFP49454 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.45■□□□□ 0.22
CENPFP49454 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.45■□□□□ 0.22
CENPFP49454 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 IGKV1OR-2-201ENST00000457995 350 ntBASIC16.45■□□□□ 0.22
CENPFP49454 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CENPFP49454 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC16.45■□□□□ 0.22
CENPFP49454 CTBP2P6-201ENST00000526402 1229 ntBASIC16.45■□□□□ 0.22
CENPFP49454 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.45■□□□□ 0.22
CENPFP49454 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CENPFP49454 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC16.45■□□□□ 0.22
CENPFP49454 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CENPFP49454 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.45■□□□□ 0.22
CENPFP49454 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CENPFP49454 AHCYP4-201ENST00000419201 1315 ntBASIC16.45■□□□□ 0.22
CENPFP49454 LINC01101-201ENST00000622953 1884 ntBASIC16.45■□□□□ 0.22
CENPFP49454 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.45■□□□□ 0.22
CENPFP49454 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.45■□□□□ 0.22
CENPFP49454 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CENPFP49454 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.45■□□□□ 0.22
CENPFP49454 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC16.45■□□□□ 0.22
CENPFP49454 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.45■□□□□ 0.22
CENPFP49454 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC16.45■□□□□ 0.22
CENPFP49454 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CENPFP49454 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CENPFP49454 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.45■□□□□ 0.22
CENPFP49454 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms