Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.38□□□□□ -0.27
SLC6A9P48067 AL035633.1-201ENST00000406139 838 ntBASIC13.38□□□□□ -0.27
SLC6A9P48067 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.38□□□□□ -0.27
SLC6A9P48067 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.38□□□□□ -0.27
SLC6A9P48067 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.38□□□□□ -0.27
SLC6A9P48067 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.38□□□□□ -0.27
SLC6A9P48067 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.38□□□□□ -0.27
SLC6A9P48067 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.38□□□□□ -0.27
SLC6A9P48067 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.38□□□□□ -0.27
SLC6A9P48067 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.38□□□□□ -0.27
SLC6A9P48067 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.38□□□□□ -0.27
SLC6A9P48067 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.38□□□□□ -0.27
SLC6A9P48067 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.38□□□□□ -0.27
SLC6A9P48067 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.38□□□□□ -0.27
SLC6A9P48067 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.38□□□□□ -0.27
SLC6A9P48067 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
SLC6A9P48067 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SLC6A9P48067 LINC00552-201ENST00000625151 2579 ntBASIC13.37□□□□□ -0.27
SLC6A9P48067 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
SLC6A9P48067 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
SLC6A9P48067 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.37□□□□□ -0.27
SLC6A9P48067 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SLC6A9P48067 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SLC6A9P48067 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SLC6A9P48067 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SLC6A9P48067 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 SPDYE19P-201ENST00000338590 713 ntBASIC13.37□□□□□ -0.27
SLC6A9P48067 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.37□□□□□ -0.27
SLC6A9P48067 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 FAM86LP-201ENST00000478302 853 ntBASIC13.37□□□□□ -0.27
SLC6A9P48067 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.37□□□□□ -0.27
SLC6A9P48067 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.37□□□□□ -0.27
SLC6A9P48067 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.37□□□□□ -0.27
SLC6A9P48067 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.37□□□□□ -0.27
SLC6A9P48067 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.37□□□□□ -0.27
SLC6A9P48067 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SLC6A9P48067 C8orf49-201ENST00000525043 1968 ntBASIC13.37□□□□□ -0.27
SLC6A9P48067 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.37□□□□□ -0.27
SLC6A9P48067 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SLC6A9P48067 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.37□□□□□ -0.27
SLC6A9P48067 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLC6A9P48067 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.37□□□□□ -0.27
SLC6A9P48067 AC005912.2-201ENST00000619492 2400 ntBASIC13.37□□□□□ -0.27
SLC6A9P48067 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC6A9P48067 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC6A9P48067 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.36□□□□□ -0.27
SLC6A9P48067 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SLC6A9P48067 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLC6A9P48067 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC6A9P48067 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC6A9P48067 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC6A9P48067 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
SLC6A9P48067 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.36□□□□□ -0.27
SLC6A9P48067 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC6A9P48067 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC6A9P48067 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC6A9P48067 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.36□□□□□ -0.27
SLC6A9P48067 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC6A9P48067 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLC6A9P48067 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms