Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.68■□□□□ 0.1
MTHFRP42898 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.68■□□□□ 0.1
MTHFRP42898 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
MTHFRP42898 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
MTHFRP42898 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.68■□□□□ 0.1
MTHFRP42898 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
MTHFRP42898 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
MTHFRP42898 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 AL355334.1-201ENST00000417713 215 ntBASIC15.68■□□□□ 0.1
MTHFRP42898 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.68■□□□□ 0.1
MTHFRP42898 AC012441.2-201ENST00000444843 739 ntBASIC15.68■□□□□ 0.1
MTHFRP42898 POU5F1P2-201ENST00000521750 823 ntBASIC15.68■□□□□ 0.1
MTHFRP42898 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
MTHFRP42898 AC009779.1-201ENST00000551138 283 ntBASIC15.68■□□□□ 0.1
MTHFRP42898 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
MTHFRP42898 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.68■□□□□ 0.1
MTHFRP42898 MIR4754-201ENST00000582477 89 ntBASIC15.68■□□□□ 0.1
MTHFRP42898 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
MTHFRP42898 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.68■□□□□ 0.1
MTHFRP42898 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.68■□□□□ 0.1
MTHFRP42898 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.68■□□□□ 0.1
MTHFRP42898 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
MTHFRP42898 HLA-C-210ENST00000640219 976 ntBASIC15.68■□□□□ 0.1
MTHFRP42898 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
MTHFRP42898 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.68■□□□□ 0.1
MTHFRP42898 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.68■□□□□ 0.1
MTHFRP42898 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFRP42898 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFRP42898 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFRP42898 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.67■□□□□ 0.1
MTHFRP42898 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFRP42898 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFRP42898 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
MTHFRP42898 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.67■□□□□ 0.1
MTHFRP42898 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFRP42898 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFRP42898 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.67■□□□□ 0.1
MTHFRP42898 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFRP42898 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MTHFRP42898 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFRP42898 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFRP42898 AC127383.1-201ENST00000444697 1800 ntBASIC15.67■□□□□ 0.1
MTHFRP42898 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
MTHFRP42898 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFRP42898 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.67■□□□□ 0.1
MTHFRP42898 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFRP42898 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFRP42898 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.67■□□□□ 0.1
MTHFRP42898 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.67■□□□□ 0.1
MTHFRP42898 RN7SL8P-201ENST00000461771 266 ntBASIC15.67■□□□□ 0.1
MTHFRP42898 HLA-J-204ENST00000495278 958 ntBASIC15.67■□□□□ 0.1
MTHFRP42898 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
MTHFRP42898 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.67■□□□□ 0.1
MTHFRP42898 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.67■□□□□ 0.1
MTHFRP42898 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.67■□□□□ 0.1
MTHFRP42898 NPM1P43-201ENST00000558669 786 ntBASIC15.67■□□□□ 0.1
MTHFRP42898 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.67■□□□□ 0.1
MTHFRP42898 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
MTHFRP42898 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.67■□□□□ 0.1
MTHFRP42898 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
MTHFRP42898 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.67■□□□□ 0.1
MTHFRP42898 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
MTHFRP42898 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.67■□□□□ 0.1
MTHFRP42898 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
MTHFRP42898 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
MTHFRP42898 E2F3P2-201ENST00000447755 1422 ntBASIC15.67■□□□□ 0.1
MTHFRP42898 TBC1D3J-201ENST00000620719 1426 ntBASIC15.67■□□□□ 0.1
MTHFRP42898 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.67■□□□□ 0.1
MTHFRP42898 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFRP42898 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.67■□□□□ 0.1
MTHFRP42898 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFRP42898 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFRP42898 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFRP42898 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFRP42898 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.66■□□□□ 0.1
MTHFRP42898 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFRP42898 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFRP42898 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms