Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.79■□□□□ 0.28
HOXC6P09630 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC6P09630 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC6P09630 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC6P09630 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC6P09630 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.79■□□□□ 0.28
HOXC6P09630 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC6P09630 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC6P09630 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC6P09630 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC6P09630 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.78■□□□□ 0.28
HOXC6P09630 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HOXC6P09630 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HOXC6P09630 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.78■□□□□ 0.28
HOXC6P09630 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC6P09630 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC6P09630 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC6P09630 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HOXC6P09630 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC6P09630 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
HOXC6P09630 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.78■□□□□ 0.28
HOXC6P09630 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC6P09630 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC6P09630 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC6P09630 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC6P09630 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.78■□□□□ 0.28
HOXC6P09630 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC6P09630 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC6P09630 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HOXC6P09630 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.78■□□□□ 0.28
HOXC6P09630 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.78■□□□□ 0.28
HOXC6P09630 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC6P09630 RPL8P2-201ENST00000430538 502 ntBASIC16.78■□□□□ 0.28
HOXC6P09630 XBP1P1-201ENST00000436573 652 ntBASIC16.78■□□□□ 0.28
HOXC6P09630 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.78■□□□□ 0.28
HOXC6P09630 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.78■□□□□ 0.28
HOXC6P09630 RN7SL818P-201ENST00000485099 259 ntBASIC16.78■□□□□ 0.28
HOXC6P09630 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.78■□□□□ 0.28
HOXC6P09630 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.78■□□□□ 0.28
HOXC6P09630 MIR3188-201ENST00000583494 85 ntBASIC16.78■□□□□ 0.28
HOXC6P09630 AC005632.3-201ENST00000605544 308 ntBASIC16.78■□□□□ 0.28
HOXC6P09630 RN7SL725P-201ENST00000606439 259 ntBASIC16.78■□□□□ 0.28
HOXC6P09630 LINC01783-202ENST00000614408 828 ntBASIC16.78■□□□□ 0.28
HOXC6P09630 BX284668.2-205ENST00000619677 828 ntBASIC16.78■□□□□ 0.28
HOXC6P09630 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC6P09630 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
HOXC6P09630 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC6P09630 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.78■□□□□ 0.28
HOXC6P09630 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.78■□□□□ 0.28
HOXC6P09630 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC6P09630 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC6P09630 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HOXC6P09630 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
HOXC6P09630 AC087481.3-201ENST00000602886 1894 ntBASIC16.78■□□□□ 0.28
HOXC6P09630 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.78■□□□□ 0.28
HOXC6P09630 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.78■□□□□ 0.28
HOXC6P09630 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC6P09630 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC6P09630 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC6P09630 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.77■□□□□ 0.28
HOXC6P09630 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.77■□□□□ 0.28
HOXC6P09630 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC6P09630 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.77■□□□□ 0.28
HOXC6P09630 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC6P09630 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC6P09630 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC6P09630 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
HOXC6P09630 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC6P09630 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC6P09630 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC6P09630 AL627389.1-201ENST00000413508 1182 ntBASIC16.77■□□□□ 0.28
HOXC6P09630 AL592076.1-201ENST00000424448 303 ntBASIC16.77■□□□□ 0.28
HOXC6P09630 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.77■□□□□ 0.28
HOXC6P09630 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.77■□□□□ 0.28
HOXC6P09630 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.77■□□□□ 0.28
HOXC6P09630 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.77■□□□□ 0.28
HOXC6P09630 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HOXC6P09630 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.77■□□□□ 0.28
HOXC6P09630 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.77■□□□□ 0.28
HOXC6P09630 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
HOXC6P09630 AP001065.2-201ENST00000617205 644 ntBASIC16.77■□□□□ 0.28
HOXC6P09630 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC6P09630 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HOXC6P09630 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
HOXC6P09630 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
HOXC6P09630 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.77■□□□□ 0.27
HOXC6P09630 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HOXC6P09630 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
HOXC6P09630 SALL4P5-201ENST00000419001 1760 ntBASIC16.77■□□□□ 0.27
HOXC6P09630 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.76■□□□□ 0.27
HOXC6P09630 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 AC023090.2-201ENST00000625182 2110 ntBASIC16.76■□□□□ 0.27
HOXC6P09630 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.76■□□□□ 0.27
HOXC6P09630 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.76■□□□□ 0.27
HOXC6P09630 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.76■□□□□ 0.27
HOXC6P09630 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXC6P09630 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms