Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC19.21■□□□□ 0.67
COL5A2P05997 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC19.21■□□□□ 0.67
COL5A2P05997 GNG10P1-201ENST00000452289 199 ntBASIC19.21■□□□□ 0.67
COL5A2P05997 RN7SL494P-201ENST00000461517 304 ntBASIC19.21■□□□□ 0.67
COL5A2P05997 IGHV1-12-201ENST00000518307 205 ntBASIC19.21■□□□□ 0.67
COL5A2P05997 FAM86B3P-203ENST00000523992 854 ntBASIC19.21■□□□□ 0.67
COL5A2P05997 NAA40-205ENST00000539656 577 ntTSL 4 BASIC19.21■□□□□ 0.67
COL5A2P05997 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC19.21■□□□□ 0.67
COL5A2P05997 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC19.21■□□□□ 0.67
COL5A2P05997 AC010976.2-201ENST00000609697 852 ntBASIC19.21■□□□□ 0.67
COL5A2P05997 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC19.21■□□□□ 0.67
COL5A2P05997 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
COL5A2P05997 AGGF1P1-201ENST00000509500 2073 ntBASIC19.21■□□□□ 0.67
COL5A2P05997 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL5A2P05997 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL5A2P05997 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC19.2■□□□□ 0.66
COL5A2P05997 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL5A2P05997 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL5A2P05997 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COL5A2P05997 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL5A2P05997 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
COL5A2P05997 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL5A2P05997 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
COL5A2P05997 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL5A2P05997 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL5A2P05997 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC19.2■□□□□ 0.66
COL5A2P05997 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL5A2P05997 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COL5A2P05997 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COL5A2P05997 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
COL5A2P05997 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC19.2■□□□□ 0.66
COL5A2P05997 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC19.2■□□□□ 0.66
COL5A2P05997 FAM86KP-201ENST00000509817 987 ntBASIC19.2■□□□□ 0.66
COL5A2P05997 AC106047.2-201ENST00000511723 743 ntBASIC19.2■□□□□ 0.66
COL5A2P05997 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC19.2■□□□□ 0.66
COL5A2P05997 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COL5A2P05997 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
COL5A2P05997 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC19.2■□□□□ 0.66
COL5A2P05997 AL133467.4-201ENST00000602953 725 ntBASIC19.2■□□□□ 0.66
COL5A2P05997 HMGB1P24-201ENST00000611897 328 ntBASIC19.2■□□□□ 0.66
COL5A2P05997 AL591471.1-201ENST00000621855 229 ntBASIC19.2■□□□□ 0.66
COL5A2P05997 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL5A2P05997 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL5A2P05997 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
COL5A2P05997 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC19.2■□□□□ 0.66
COL5A2P05997 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
COL5A2P05997 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.2■□□□□ 0.66
COL5A2P05997 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL5A2P05997 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL5A2P05997 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL5A2P05997 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL5A2P05997 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL5A2P05997 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL5A2P05997 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL5A2P05997 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL5A2P05997 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL5A2P05997 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC19.19■□□□□ 0.66
COL5A2P05997 CICP23-201ENST00000605013 2741 ntBASIC19.19■□□□□ 0.66
COL5A2P05997 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.19■□□□□ 0.66
COL5A2P05997 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL5A2P05997 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL5A2P05997 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
COL5A2P05997 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
COL5A2P05997 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
COL5A2P05997 NME4-203ENST00000397722 1232 ntTSL 2 BASIC19.19■□□□□ 0.66
COL5A2P05997 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
COL5A2P05997 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC19.19■□□□□ 0.66
COL5A2P05997 ACTBP7-201ENST00000418351 1124 ntBASIC19.19■□□□□ 0.66
COL5A2P05997 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL5A2P05997 RNA5SP406-201ENST00000516106 112 ntBASIC19.19■□□□□ 0.66
COL5A2P05997 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC19.19■□□□□ 0.66
COL5A2P05997 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC19.19■□□□□ 0.66
COL5A2P05997 USB1-205ENST00000561743 1135 ntTSL 3 BASIC19.19■□□□□ 0.66
COL5A2P05997 AC027139.1-201ENST00000565286 951 ntBASIC19.19■□□□□ 0.66
COL5A2P05997 HELLS-212ENST00000630929 400 ntTSL 5 BASIC19.19■□□□□ 0.66
COL5A2P05997 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL5A2P05997 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL5A2P05997 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL5A2P05997 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL5A2P05997 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL5A2P05997 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL5A2P05997 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
COL5A2P05997 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
COL5A2P05997 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL5A2P05997 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
COL5A2P05997 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COL5A2P05997 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL5A2P05997 RNF165-205ENST00000588679 2904 ntBASIC19.18■□□□□ 0.66
COL5A2P05997 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
COL5A2P05997 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL5A2P05997 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC19.18■□□□□ 0.66
COL5A2P05997 ACTG1P19-201ENST00000418987 1116 ntBASIC19.18■□□□□ 0.66
COL5A2P05997 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COL5A2P05997 KRT18P46-201ENST00000435568 1279 ntBASIC19.18■□□□□ 0.66
COL5A2P05997 SCARNA12-201ENST00000459155 270 ntBASIC19.18■□□□□ 0.66
COL5A2P05997 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC19.18■□□□□ 0.66
COL5A2P05997 OR2A1-AS1-210ENST00000496968 531 ntBASIC19.18■□□□□ 0.66
COL5A2P05997 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC19.18■□□□□ 0.66
COL5A2P05997 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC19.18■□□□□ 0.66
COL5A2P05997 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms