Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EXTL3O43909 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
EXTL3O43909 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
EXTL3O43909 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.27■□□□□ 0.19
EXTL3O43909 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.27■□□□□ 0.19
EXTL3O43909 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
EXTL3O43909 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.26■□□□□ 0.19
EXTL3O43909 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
EXTL3O43909 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.26■□□□□ 0.19
EXTL3O43909 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.26■□□□□ 0.19
EXTL3O43909 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.26■□□□□ 0.19
EXTL3O43909 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.26■□□□□ 0.19
EXTL3O43909 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 AC004945.1-201ENST00000416738 983 ntBASIC16.26■□□□□ 0.19
EXTL3O43909 AC099336.1-201ENST00000417053 1171 ntBASIC16.26■□□□□ 0.19
EXTL3O43909 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 CSF2RBP1-201ENST00000447905 391 ntBASIC16.26■□□□□ 0.19
EXTL3O43909 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.26■□□□□ 0.19
EXTL3O43909 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.26■□□□□ 0.19
EXTL3O43909 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.26■□□□□ 0.19
EXTL3O43909 C2orf69P2-201ENST00000562032 1123 ntBASIC16.26■□□□□ 0.19
EXTL3O43909 AC073413.1-201ENST00000603927 732 ntBASIC16.26■□□□□ 0.19
EXTL3O43909 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.26■□□□□ 0.19
EXTL3O43909 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.26■□□□□ 0.19
EXTL3O43909 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.26■□□□□ 0.19
EXTL3O43909 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.26■□□□□ 0.19
EXTL3O43909 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.26■□□□□ 0.19
EXTL3O43909 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
EXTL3O43909 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
EXTL3O43909 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
EXTL3O43909 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 MTHFR-210ENST00000641407 2387 ntBASIC16.26■□□□□ 0.19
EXTL3O43909 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.26■□□□□ 0.19
EXTL3O43909 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
EXTL3O43909 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.26■□□□□ 0.19
EXTL3O43909 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EXTL3O43909 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EXTL3O43909 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.25■□□□□ 0.19
EXTL3O43909 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
EXTL3O43909 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.25■□□□□ 0.19
EXTL3O43909 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EXTL3O43909 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EXTL3O43909 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
EXTL3O43909 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EXTL3O43909 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.25■□□□□ 0.19
EXTL3O43909 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EXTL3O43909 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EXTL3O43909 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EXTL3O43909 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.25■□□□□ 0.19
EXTL3O43909 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EXTL3O43909 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.25■□□□□ 0.19
EXTL3O43909 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
EXTL3O43909 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
EXTL3O43909 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EXTL3O43909 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.25■□□□□ 0.19
EXTL3O43909 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.25■□□□□ 0.19
EXTL3O43909 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.25■□□□□ 0.19
EXTL3O43909 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EXTL3O43909 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.25■□□□□ 0.19
EXTL3O43909 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.25■□□□□ 0.19
EXTL3O43909 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
EXTL3O43909 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EXTL3O43909 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EXTL3O43909 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
EXTL3O43909 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EXTL3O43909 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.25■□□□□ 0.19
EXTL3O43909 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.25■□□□□ 0.19
EXTL3O43909 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EXTL3O43909 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EXTL3O43909 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
EXTL3O43909 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EXTL3O43909 AC009093.2-202ENST00000620513 2079 ntBASIC16.25■□□□□ 0.19
EXTL3O43909 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
EXTL3O43909 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.25■□□□□ 0.19
EXTL3O43909 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
EXTL3O43909 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EXTL3O43909 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
EXTL3O43909 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EXTL3O43909 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
EXTL3O43909 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms