Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 UPK3BP1-201ENST00000428678 509 ntBASIC11.05□□□□□ -0.64
SMKR1H3BMG3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 MIR7706-201ENST00000613747 67 ntBASIC11.05□□□□□ -0.64
SMKR1H3BMG3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.05□□□□□ -0.64
SMKR1H3BMG3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
SMKR1H3BMG3 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 HLA-H-201ENST00000383620 1096 ntBASIC11.04□□□□□ -0.64
SMKR1H3BMG3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 RNA5SP415-201ENST00000517246 115 ntBASIC11.04□□□□□ -0.64
SMKR1H3BMG3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 AP002472.1-201ENST00000577490 586 ntBASIC11.04□□□□□ -0.64
SMKR1H3BMG3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 AC008267.7-201ENST00000624570 1194 ntBASIC11.04□□□□□ -0.64
SMKR1H3BMG3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 CICP16-201ENST00000502609 2813 ntBASIC11.04□□□□□ -0.64
SMKR1H3BMG3 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.04□□□□□ -0.64
SMKR1H3BMG3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms