Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC11.04□□□□□ -0.64
MUC4Q99102 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.04□□□□□ -0.64
MUC4Q99102 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.04□□□□□ -0.64
MUC4Q99102 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC11.04□□□□□ -0.64
MUC4Q99102 SRD5A3P1-201ENST00000603021 949 ntBASIC11.04□□□□□ -0.64
MUC4Q99102 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.04□□□□□ -0.64
MUC4Q99102 AC004461.2-201ENST00000629517 803 ntBASIC11.04□□□□□ -0.64
MUC4Q99102 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MUC4Q99102 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MUC4Q99102 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MUC4Q99102 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MUC4Q99102 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MUC4Q99102 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.04□□□□□ -0.64
MUC4Q99102 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
MUC4Q99102 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MUC4Q99102 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MUC4Q99102 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.04□□□□□ -0.64
MUC4Q99102 R3HDM2P2-201ENST00000401880 2116 ntBASIC11.04□□□□□ -0.64
MUC4Q99102 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MUC4Q99102 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC11.04□□□□□ -0.64
MUC4Q99102 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MUC4Q99102 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
MUC4Q99102 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MUC4Q99102 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
MUC4Q99102 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
MUC4Q99102 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC11.04□□□□□ -0.64
MUC4Q99102 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC11.04□□□□□ -0.64
MUC4Q99102 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.04□□□□□ -0.64
MUC4Q99102 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
MUC4Q99102 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
MUC4Q99102 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
MUC4Q99102 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
MUC4Q99102 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
MUC4Q99102 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.03□□□□□ -0.64
MUC4Q99102 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC11.03□□□□□ -0.64
MUC4Q99102 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC11.03□□□□□ -0.64
MUC4Q99102 MIR4525-201ENST00000580000 75 ntBASIC11.03□□□□□ -0.64
MUC4Q99102 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC11.03□□□□□ -0.64
MUC4Q99102 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
MUC4Q99102 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.03□□□□□ -0.64
MUC4Q99102 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.03□□□□□ -0.64
MUC4Q99102 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
MUC4Q99102 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 AC152010.1-201ENST00000415779 2006 ntBASIC11.03□□□□□ -0.64
MUC4Q99102 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.03□□□□□ -0.64
MUC4Q99102 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.03□□□□□ -0.64
MUC4Q99102 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.03□□□□□ -0.64
MUC4Q99102 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.03□□□□□ -0.64
MUC4Q99102 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
MUC4Q99102 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 FTH1-202ENST00000526640 786 ntTSL 2 BASIC11.03□□□□□ -0.64
MUC4Q99102 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MUC4Q99102 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms