Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CPNE2Q96FN4 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 AP006288.1-201ENST00000446065 395 ntBASIC13.18□□□□□ -0.3
CPNE2Q96FN4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPNE2Q96FN4 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 RPSAP43-201ENST00000402237 625 ntBASIC13.17□□□□□ -0.3
CPNE2Q96FN4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 RPL37AP1-201ENST00000412502 279 ntBASIC13.17□□□□□ -0.3
CPNE2Q96FN4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 AC051619.7-201ENST00000568314 623 ntBASIC13.17□□□□□ -0.3
CPNE2Q96FN4 SAMD11P1-201ENST00000571429 661 ntBASIC13.17□□□□□ -0.3
CPNE2Q96FN4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 AC000095.1-201ENST00000603208 874 ntBASIC13.17□□□□□ -0.3
CPNE2Q96FN4 TEX28P1-201ENST00000613479 1221 ntBASIC13.17□□□□□ -0.3
CPNE2Q96FN4 TEX28P2-201ENST00000617764 1221 ntBASIC13.17□□□□□ -0.3
CPNE2Q96FN4 AC073592.8-201ENST00000624126 511 ntBASIC13.17□□□□□ -0.3
CPNE2Q96FN4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms