Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 AC079776.1-201ENST00000401540 1152 ntBASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 ACA64.2-201ENST00000459014 129 ntBASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 FTH1P14-201ENST00000482930 551 ntBASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 IGHV3-71-201ENST00000523324 359 ntBASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 HILS1-202ENST00000545329 423 ntBASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 AC004466.1-201ENST00000599515 1080 ntBASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 AC244669.2-201ENST00000612320 853 ntBASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 AC023090.2-201ENST00000625182 2110 ntBASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 C8orf49-201ENST00000525043 1968 ntBASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.15■□□□□ 0.02
LYSMD3Q7Z3D4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 PKD1P5-201ENST00000532415 10291 ntBASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 AC025279.2-201ENST00000569730 653 ntBASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 AL603764.1-201ENST00000636452 321 ntBASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 LINC01101-201ENST00000622953 1884 ntBASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD3Q7Z3D4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD3Q7Z3D4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms