Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 TCAF1P1-201ENST00000414990 2232 ntBASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNI2Q6ZMN8 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 AL365209.1-201ENST00000624418 6473 ntBASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 AC011495.1-201ENST00000498085 584 ntBASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 AC092658.1-201ENST00000505836 891 ntBASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 AC023090.2-201ENST00000625182 2110 ntBASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.02■□□□□ 0.16
CCNI2Q6ZMN8 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCNI2Q6ZMN8 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.02■□□□□ 0.15
CCNI2Q6ZMN8 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CCNI2Q6ZMN8 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CCNI2Q6ZMN8 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCNI2Q6ZMN8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCNI2Q6ZMN8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.02■□□□□ 0.15
CCNI2Q6ZMN8 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.02■□□□□ 0.15
CCNI2Q6ZMN8 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CCNI2Q6ZMN8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCNI2Q6ZMN8 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCNI2Q6ZMN8 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 AC087499.5-201ENST00000452760 1342 ntBASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 AC055811.4-201ENST00000624039 1754 ntBASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 AC099521.3-201ENST00000624251 2938 ntBASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 AC112492.5-201ENST00000421897 457 ntBASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 TPT1P11-201ENST00000458482 498 ntBASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 KRT17P8-201ENST00000540749 863 ntBASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 RAB43P1-201ENST00000561790 589 ntBASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 AC132938.2-201ENST00000579188 680 ntBASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 AL591163.1-201ENST00000641757 987 ntBASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNI2Q6ZMN8 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms