Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNB3Q15768 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.83□□□□□ -0.36
EFNB3Q15768 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
EFNB3Q15768 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNB3Q15768 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNB3Q15768 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
EFNB3Q15768 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
EFNB3Q15768 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
EFNB3Q15768 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.82□□□□□ -0.36
EFNB3Q15768 MIR663B-201ENST00000408361 115 ntBASIC12.82□□□□□ -0.36
EFNB3Q15768 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.82□□□□□ -0.36
EFNB3Q15768 AC004945.1-201ENST00000416738 983 ntBASIC12.82□□□□□ -0.36
EFNB3Q15768 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 TLE1P1-201ENST00000422965 589 ntBASIC12.82□□□□□ -0.36
EFNB3Q15768 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.82□□□□□ -0.36
EFNB3Q15768 POM121L10P-201ENST00000436994 1285 ntBASIC12.82□□□□□ -0.36
EFNB3Q15768 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.82□□□□□ -0.36
EFNB3Q15768 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.82□□□□□ -0.36
EFNB3Q15768 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.82□□□□□ -0.36
EFNB3Q15768 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.82□□□□□ -0.36
EFNB3Q15768 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.82□□□□□ -0.36
EFNB3Q15768 MIR6787-201ENST00000616675 61 ntBASIC12.82□□□□□ -0.36
EFNB3Q15768 AL008638.5-201ENST00000623814 1298 ntBASIC12.82□□□□□ -0.36
EFNB3Q15768 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.82□□□□□ -0.36
EFNB3Q15768 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.82□□□□□ -0.36
EFNB3Q15768 KRT8P4-201ENST00000509735 1454 ntBASIC12.82□□□□□ -0.36
EFNB3Q15768 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.82□□□□□ -0.36
EFNB3Q15768 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
EFNB3Q15768 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
EFNB3Q15768 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
EFNB3Q15768 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
EFNB3Q15768 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EFNB3Q15768 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.82□□□□□ -0.36
EFNB3Q15768 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
EFNB3Q15768 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
EFNB3Q15768 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.81□□□□□ -0.36
EFNB3Q15768 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.81□□□□□ -0.36
EFNB3Q15768 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
EFNB3Q15768 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.81□□□□□ -0.36
EFNB3Q15768 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.81□□□□□ -0.36
EFNB3Q15768 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
EFNB3Q15768 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.81□□□□□ -0.36
EFNB3Q15768 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
EFNB3Q15768 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
EFNB3Q15768 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms