Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.81□□□□□ -0.04
LIMK1P53667 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LIMK1P53667 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
LIMK1P53667 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LIMK1P53667 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LIMK1P53667 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LIMK1P53667 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.81□□□□□ -0.04
LIMK1P53667 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.8□□□□□ -0.04
LIMK1P53667 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
LIMK1P53667 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
LIMK1P53667 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.8□□□□□ -0.04
LIMK1P53667 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LIMK1P53667 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LIMK1P53667 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.8□□□□□ -0.04
LIMK1P53667 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LIMK1P53667 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.8□□□□□ -0.04
LIMK1P53667 EIF3FP3-201ENST00000434851 1086 ntBASIC14.8□□□□□ -0.04
LIMK1P53667 FAM58BP-201ENST00000439056 645 ntBASIC14.8□□□□□ -0.04
LIMK1P53667 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 AC130709.1-201ENST00000484779 1212 ntBASIC14.8□□□□□ -0.04
LIMK1P53667 AC004066.1-201ENST00000502488 802 ntBASIC14.8□□□□□ -0.04
LIMK1P53667 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.8□□□□□ -0.04
LIMK1P53667 POU5F1P2-201ENST00000521750 823 ntBASIC14.8□□□□□ -0.04
LIMK1P53667 AL160314.3-201ENST00000556041 767 ntBASIC14.8□□□□□ -0.04
LIMK1P53667 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.8□□□□□ -0.04
LIMK1P53667 SNORD3B-2-202ENST00000571722 791 ntBASIC14.8□□□□□ -0.04
LIMK1P53667 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
LIMK1P53667 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.8□□□□□ -0.04
LIMK1P53667 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LIMK1P53667 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
LIMK1P53667 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LIMK1P53667 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LIMK1P53667 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
LIMK1P53667 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LIMK1P53667 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
LIMK1P53667 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.8□□□□□ -0.04
LIMK1P53667 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.8□□□□□ -0.04
LIMK1P53667 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.8□□□□□ -0.04
LIMK1P53667 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LIMK1P53667 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.8□□□□□ -0.04
LIMK1P53667 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LIMK1P53667 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK1P53667 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK1P53667 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LIMK1P53667 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.79□□□□□ -0.04
LIMK1P53667 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.79□□□□□ -0.04
LIMK1P53667 SNX18-202ENST00000343017 3140 ntBASIC14.79□□□□□ -0.04
LIMK1P53667 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK1P53667 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK1P53667 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LIMK1P53667 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK1P53667 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK1P53667 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK1P53667 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK1P53667 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK1P53667 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK1P53667 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK1P53667 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK1P53667 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.79□□□□□ -0.04
LIMK1P53667 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LIMK1P53667 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK1P53667 GHSR-202ENST00000427970 912 ntBASIC14.79□□□□□ -0.04
LIMK1P53667 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.79□□□□□ -0.04
LIMK1P53667 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK1P53667 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC14.79□□□□□ -0.04
LIMK1P53667 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK1P53667 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LIMK1P53667 RN7SL258P-201ENST00000478664 300 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms