Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC9.87□□□□□ -0.83
PCP4P48539 ASL-204ENST00000395331 1538 ntTSL 5 BASIC9.87□□□□□ -0.83
PCP4P48539 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
PCP4P48539 DNAH2-203ENST00000572933 14955 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
PCP4P48539 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
PCP4P48539 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
PCP4P48539 FIRRE-201ENST00000427391 2926 ntTSL 2 BASIC9.86□□□□□ -0.83
PCP4P48539 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
PCP4P48539 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 CCDC149-202ENST00000389609 2127 ntAPPRIS P3 TSL 2 BASIC9.86□□□□□ -0.83
PCP4P48539 AC093802.1-201ENST00000407524 3238 ntTSL 2 BASIC9.86□□□□□ -0.83
PCP4P48539 CRX-202ENST00000539067 2275 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
PCP4P48539 AC126323.1-203ENST00000562306 2579 ntBASIC9.86□□□□□ -0.83
PCP4P48539 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC9.86□□□□□ -0.83
PCP4P48539 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC9.86□□□□□ -0.83
PCP4P48539 FLII-215ENST00000545457 3975 ntTSL 2 BASIC9.86□□□□□ -0.83
PCP4P48539 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC9.86□□□□□ -0.83
PCP4P48539 PLAGL1-203ENST00000367571 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 PPP1R12A-203ENST00000450142 5721 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 ARHGAP6-205ENST00000380736 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 PCDHGA10-201ENST00000398610 4617 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 SLC24A1-202ENST00000339868 5678 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
PCP4P48539 NT5E-201ENST00000257770 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 SCLT1-201ENST00000281142 3055 ntAPPRIS P3 TSL 2 BASIC9.86□□□□□ -0.83
PCP4P48539 SLC34A2-201ENST00000382051 4122 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC9.86□□□□□ -0.83
PCP4P48539 SMYD1-201ENST00000419482 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC9.86□□□□□ -0.83
PCP4P48539 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 CFL2-205ENST00000555765 632 ntTSL 2 BASIC9.86□□□□□ -0.83
PCP4P48539 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC9.86□□□□□ -0.83
PCP4P48539 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC9.86□□□□□ -0.83
PCP4P48539 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 ARHGEF9-221ENST00000635967 2179 ntTSL 5 BASIC9.86□□□□□ -0.83
PCP4P48539 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 LHX4-201ENST00000263726 5820 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 ITIH4-202ENST00000406595 2872 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
PCP4P48539 PITRM1-203ENST00000380994 2579 ntTSL 5 BASIC9.86□□□□□ -0.83
PCP4P48539 TCOF1-205ENST00000439160 4644 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
PCP4P48539 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC9.86□□□□□ -0.83
PCP4P48539 AL109659.2-201ENST00000606809 1674 ntBASIC9.86□□□□□ -0.83
PCP4P48539 KCNE4-201ENST00000281830 3291 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 NUTM2A-201ENST00000381689 3974 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
PCP4P48539 FP700111.1-201ENST00000441760 2502 ntTSL 2 BASIC9.86□□□□□ -0.83
PCP4P48539 CALCR-201ENST00000359558 3696 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
PCP4P48539 TTYH2-202ENST00000441391 3661 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 SUCLG2-AS1-202ENST00000482677 2226 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 FAM13B-202ENST00000420893 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 AC098679.1-201ENST00000503611 2917 ntTSL 2 BASIC9.86□□□□□ -0.83
PCP4P48539 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC9.86□□□□□ -0.83
PCP4P48539 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PCP4P48539 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC9.86□□□□□ -0.83
PCP4P48539 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 C1orf64-201ENST00000329454 3039 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 MYBBP1A-202ENST00000381556 4104 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
PCP4P48539 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 ANO3-201ENST00000256737 6642 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 DEF8-227ENST00000570182 3549 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
PCP4P48539 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC9.85□□□□□ -0.83
PCP4P48539 ICA1-204ENST00000396675 2133 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 EPHA5-206ENST00000622150 8421 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC9.85□□□□□ -0.83
PCP4P48539 AC122688.3-201ENST00000623804 3467 ntBASIC9.85□□□□□ -0.83
PCP4P48539 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC9.85□□□□□ -0.83
PCP4P48539 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC9.85□□□□□ -0.83
PCP4P48539 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC9.85□□□□□ -0.83
PCP4P48539 RNF146-206ENST00000480444 843 ntTSL 2 BASIC9.85□□□□□ -0.83
PCP4P48539 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC9.85□□□□□ -0.83
PCP4P48539 AC120024.1-201ENST00000562672 995 ntBASIC9.85□□□□□ -0.83
PCP4P48539 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC9.85□□□□□ -0.83
PCP4P48539 ELP2-202ENST00000351393 2453 ntTSL 2 BASIC9.85□□□□□ -0.83
PCP4P48539 FGFR2-203ENST00000351936 2478 ntTSL 5 BASIC9.85□□□□□ -0.83
PCP4P48539 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 HKR1-204ENST00000544914 2854 ntTSL 2 BASIC9.85□□□□□ -0.83
PCP4P48539 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
PCP4P48539 BAGE2-203ENST00000496773 2598 ntBASIC9.85□□□□□ -0.83
PCP4P48539 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC9.85□□□□□ -0.83
PCP4P48539 DNASE1-202ENST00000407479 8552 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms