RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 PELP1Q8IZL8 1130 aaKnown RBP17.52■□□□□ 0.4
TRPM1-201ENST00000256552 MYT1Q01538 1121 aa17.43■□□□□ 0.38
TRPM1-201ENST00000256552 SUPT5HO00267 1087 aaKnown RBP16.45■□□□□ 0.22
TRPM1-201ENST00000256552 PCGF6Q9BYE7 350 aa16.28■□□□□ 0.2
TRPM1-201ENST00000256552 TTBK1Q5TCY1 1321 aaPredicted RBP16.25■□□□□ 0.19
TRPM1-201ENST00000256552 DCAF8L2P0C7V8 631 aa16.24■□□□□ 0.19
TRPM1-201ENST00000256552 HRCP23327 699 aa16.03■□□□□ 0.16
TRPM1-201ENST00000256552 NISCHQ9Y2I1 1504 aa16.02■□□□□ 0.15
TRPM1-201ENST00000256552 CENPBP07199 599 aaPredicted RBP16.02■□□□□ 0.15
TRPM1-201ENST00000256552 SHROOM4Q9ULL8 1493 aa16■□□□□ 0.15
TRPM1-201ENST00000256552 ZEB1P37275 1124 aaPredicted RBP15.9■□□□□ 0.14
TRPM1-201ENST00000256552 ERICH6Q7L0X2 663 aa15.88■□□□□ 0.13
TRPM1-201ENST00000256552 CCER1Q8TC90 406 aaPredicted RBP15.85■□□□□ 0.13
TRPM1-201ENST00000256552 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
TRPM1-201ENST00000256552 PPARGC1BQ86YN6 1023 aaKnown RBP15.68■□□□□ 0.1
TRPM1-201ENST00000256552 YTHDC1Q96MU7 727 aaKnown RBP15.61■□□□□ 0.09
TRPM1-201ENST00000256552 FAM9AQ8IZU1 332 aaPredicted RBP15.47■□□□□ 0.07
TRPM1-201ENST00000256552 TRIM26Q12899 539 aaPredicted RBP15.45■□□□□ 0.06
TRPM1-201ENST00000256552 NEFLP07196 543 aa15.28■□□□□ 0.04
TRPM1-201ENST00000256552 GTF3C3Q9Y5Q9 886 aa15.27■□□□□ 0.04
TRPM1-201ENST00000256552 APLP2Q06481 763 aa15.27■□□□□ 0.03
TRPM1-201ENST00000256552 SCAF1Q9H7N4 1312 aaKnown RBP15.26■□□□□ 0.03
TRPM1-201ENST00000256552 ACIN1Q9UKV3 1341 aaKnown RBP15.2■□□□□ 0.02
TRPM1-201ENST00000256552 BCL11AQ9H165 835 aa15.16■□□□□ 0.02
TRPM1-201ENST00000256552 TRIM41Q8WV44 630 aa15.12■□□□□ 0.01
TRPM1-201ENST00000256552 DIEXFQ68CQ4 756 aaKnown RBP15.12■□□□□ 0.01
TRPM1-201ENST00000256552 LOC105371045A0A1W2PR82 267 aa15.09■□□□□ 0.01
TRPM1-201ENST00000256552 CHIC1Q5VXU3 224 aa15.06■□□□□ 0
TRPM1-201ENST00000256552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.94□□□□□ -0.02
TRPM1-201ENST00000256552 DAXXQ9UER7 740 aaPredicted RBP14.92□□□□□ -0.02
TRPM1-201ENST00000256552 ANP32EQ9BTT0 268 aa14.88□□□□□ -0.03
TRPM1-201ENST00000256552 RANGAP1P46060 587 aaPredicted RBP14.82□□□□□ -0.04
TRPM1-201ENST00000256552 NEUROD1Q13562 356 aa14.82□□□□□ -0.04
TRPM1-201ENST00000256552 RTL5Q5HYW3 569 aaPredicted RBP14.81□□□□□ -0.04
TRPM1-201ENST00000256552 BCANQ96GW7 911 aa14.79□□□□□ -0.04
TRPM1-201ENST00000256552 PRKCSHP14314 528 aaPredicted RBP14.79□□□□□ -0.04
TRPM1-201ENST00000256552 UBTFP17480 764 aaKnown RBP14.78□□□□□ -0.04
TRPM1-201ENST00000256552 MYT1LQ9UL68 1186 aa14.78□□□□□ -0.04
TRPM1-201ENST00000256552 CLSPNQ9HAW4 1339 aa14.68□□□□□ -0.06
TRPM1-201ENST00000256552 HNRNPUL2Q1KMD3 747 aaKnown RBP14.67□□□□□ -0.06
TRPM1-201ENST00000256552 GLIPR1L2Q4G1C9 344 aa14.66□□□□□ -0.06
TRPM1-201ENST00000256552 ZNF316A6NFI3 1004 aaPredicted RBP14.64□□□□□ -0.07
TRPM1-201ENST00000256552 EIF5BO60841 1220 aaKnown RBP14.58□□□□□ -0.08
TRPM1-201ENST00000256552 CDK11AQ9UQ88 783 aaPredicted RBP14.56□□□□□ -0.08
TRPM1-201ENST00000256552 ATP1B4Q9UN42 357 aaPredicted RBP14.47□□□□□ -0.09
TRPM1-201ENST00000256552 SLC24A1O60721 1099 aa14.47□□□□□ -0.09
TRPM1-201ENST00000256552 DCAF1Q9Y4B6 1507 aa14.46□□□□□ -0.09
TRPM1-201ENST00000256552 ITGAEP38570 1179 aa14.46□□□□□ -0.1
TRPM1-201ENST00000256552 CSRNP3Q8WYN3 585 aa14.41□□□□□ -0.1
TRPM1-201ENST00000256552 FKBP8Q14318 412 aa14.39□□□□□ -0.11
TRPM1-201ENST00000256552 CNGB1Q14028 1251 aaPredicted RBP14.33□□□□□ -0.12
TRPM1-201ENST00000256552 POLR3GLQ9BT43 218 aa14.31□□□□□ -0.12
TRPM1-201ENST00000256552 ANP32AP39687 249 aaKnown RBP14.3□□□□□ -0.12
TRPM1-201ENST00000256552 ANP32CO43423 234 aa14.29□□□□□ -0.12
TRPM1-201ENST00000256552 NBR1Q14596 966 aa14.27□□□□□ -0.13
TRPM1-201ENST00000256552 MIER1Q8N108 512 aa14.27□□□□□ -0.13
TRPM1-201ENST00000256552 MYO15BQ96JP2 1530 aa14.19□□□□□ -0.14
TRPM1-201ENST00000256552 ERICH6BQ5W0A0 696 aa14.19□□□□□ -0.14
TRPM1-201ENST00000256552 NPM2Q86SE8 214 aaKnown RBP14.18□□□□□ -0.14
TRPM1-201ENST00000256552 DEKP35659 375 aaKnown RBP14.15□□□□□ -0.14
TRPM1-201ENST00000256552 CCDC180Q9P1Z9 1646 aa14.09□□□□□ -0.15
TRPM1-201ENST00000256552 ZBTB47Q9UFB7 747 aaPredicted RBP14.08□□□□□ -0.16
TRPM1-201ENST00000256552 SUPT16HQ9Y5B9 1047 aaKnown RBP14.08□□□□□ -0.16
TRPM1-201ENST00000256552 TSHZ2Q9NRE2 1034 aa14.07□□□□□ -0.16
TRPM1-201ENST00000256552 RTN4Q9NQC3 1192 aaKnown RBP14.05□□□□□ -0.16
TRPM1-201ENST00000256552 TRIM52Q96A61 297 aa14.03□□□□□ -0.16
TRPM1-201ENST00000256552 ANP32BQ92688 251 aaKnown RBP14.01□□□□□ -0.17
TRPM1-201ENST00000256552 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.01□□□□□ -0.17
TRPM1-201ENST00000256552 HNRNPUQ00839 825 aaKnown RBP eCLIP14.01□□□□□ -0.17
TRPM1-201ENST00000256552 FAM50AQ14320 339 aaKnown RBP13.99□□□□□ -0.17
TRPM1-201ENST00000256552 PKNOX2Q96KN3 472 aa13.99□□□□□ -0.17
TRPM1-201ENST00000256552 CCDC136Q96JN2 1154 aa13.99□□□□□ -0.17
TRPM1-201ENST00000256552 DDX10Q13206 875 aaKnown RBP13.98□□□□□ -0.17
TRPM1-201ENST00000256552 IRX6P78412 446 aaPredicted RBP13.98□□□□□ -0.17
TRPM1-201ENST00000256552 ANO8Q9HCE9 1232 aaPredicted RBP13.98□□□□□ -0.17
TRPM1-201ENST00000256552 PODXL2Q9NZ53 605 aa13.97□□□□□ -0.17
TRPM1-201ENST00000256552 RBM19Q9Y4C8 960 aaKnown RBP13.96□□□□□ -0.17
TRPM1-201ENST00000256552 UBE2Q2Q8WVN8 375 aa13.88□□□□□ -0.19
TRPM1-201ENST00000256552 NOP58Q9Y2X3 529 aaKnown RBP13.84□□□□□ -0.19
TRPM1-201ENST00000256552 FAM9BQ8IZU0 186 aa13.84□□□□□ -0.19
TRPM1-201ENST00000256552 ARXQ96QS3 562 aa13.84□□□□□ -0.19
TRPM1-201ENST00000256552 TNNT2P45379 298 aaPredicted RBP13.83□□□□□ -0.19
TRPM1-201ENST00000256552 NEFMP07197 916 aa13.83□□□□□ -0.2
TRPM1-201ENST00000256552 VSIG10Q8N0Z9 540 aa13.77□□□□□ -0.21
TRPM1-201ENST00000256552 SALL2Q9Y467 1007 aaPredicted RBP13.77□□□□□ -0.21
TRPM1-201ENST00000256552 RSPH6AQ9H0K4 717 aa13.76□□□□□ -0.21
TRPM1-201ENST00000256552 ZNF326Q5BKZ1 582 aaKnown RBP13.74□□□□□ -0.21
TRPM1-201ENST00000256552 LAS1LQ9Y4W2 734 aaKnown RBP13.74□□□□□ -0.21
TRPM1-201ENST00000256552 NAP1L5Q96NT1 182 aaPredicted RBP13.73□□□□□ -0.21
TRPM1-201ENST00000256552 CANXP27824 592 aaKnown RBP13.72□□□□□ -0.21
TRPM1-201ENST00000256552 PPM1GO15355 546 aaPredicted RBP13.71□□□□□ -0.21
TRPM1-201ENST00000256552 DDRGK1Q96HY6 314 aa13.7□□□□□ -0.22
TRPM1-201ENST00000256552 HIRIP3Q9BW71 556 aaPredicted RBP13.7□□□□□ -0.22
TRPM1-201ENST00000256552 NCLP19338 710 aaKnown RBP13.7□□□□□ -0.22
TRPM1-201ENST00000256552 PPP4R2Q9NY27 417 aa13.68□□□□□ -0.22
TRPM1-201ENST00000256552 TONSLQ96HA7 1378 aa13.68□□□□□ -0.22
TRPM1-201ENST00000256552 HSP90AA1P07900 732 aaKnown RBP13.67□□□□□ -0.22
TRPM1-201ENST00000256552 MRS2Q9HD23 443 aa13.67□□□□□ -0.22
TRPM1-201ENST00000256552 UPF2Q9HAU5 1272 aaKnown RBP13.66□□□□□ -0.22
TRPM1-201ENST00000256552 SLC4A1APQ9BWU0 796 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms