RNA–Protein interactions for RNA: ENST00000419482.6

SMYD1-201, Transcript of SET and MYND domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMYD1, Length 4,433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD1-201ENST00000419482 NISCHQ9Y2I1 1504 aa19.5■□□□□ 0.71
SMYD1-201ENST00000419482 DCAF8L2P0C7V8 631 aa18.73■□□□□ 0.59
SMYD1-201ENST00000419482 SUPT5HO00267 1087 aaKnown RBP18.49■□□□□ 0.55
SMYD1-201ENST00000419482 SHROOM4Q9ULL8 1493 aa18.34■□□□□ 0.53
SMYD1-201ENST00000419482 PCGF6Q9BYE7 350 aa17.6■□□□□ 0.41
SMYD1-201ENST00000419482 EHMT2Q96KQ7 1210 aa17.56■□□□□ 0.4
SMYD1-201ENST00000419482 PELP1Q8IZL8 1130 aaKnown RBP17.49■□□□□ 0.39
SMYD1-201ENST00000419482 FAM9AQ8IZU1 332 aaPredicted RBP17.32■□□□□ 0.36
SMYD1-201ENST00000419482 MYT1Q01538 1121 aa17.22■□□□□ 0.35
SMYD1-201ENST00000419482 HRCP23327 699 aa17.1■□□□□ 0.33
SMYD1-201ENST00000419482 CHIC1Q5VXU3 224 aa17.09■□□□□ 0.33
SMYD1-201ENST00000419482 TRIM41Q8WV44 630 aa17.07■□□□□ 0.32
SMYD1-201ENST00000419482 TTBK1Q5TCY1 1321 aaPredicted RBP17■□□□□ 0.31
SMYD1-201ENST00000419482 LOC105371045A0A1W2PR82 267 aa16.97■□□□□ 0.31
SMYD1-201ENST00000419482 ZEB1P37275 1124 aaPredicted RBP16.96■□□□□ 0.31
SMYD1-201ENST00000419482 TRIM26Q12899 539 aaPredicted RBP16.88■□□□□ 0.29
SMYD1-201ENST00000419482 PPARGC1BQ86YN6 1023 aaKnown RBP16.86■□□□□ 0.29
SMYD1-201ENST00000419482 CCER1Q8TC90 406 aaPredicted RBP16.83■□□□□ 0.29
SMYD1-201ENST00000419482 APLP2Q06481 763 aa16.79■□□□□ 0.28
SMYD1-201ENST00000419482 CENPBP07199 599 aaPredicted RBP16.68■□□□□ 0.26
SMYD1-201ENST00000419482 RANGAP1P46060 587 aaPredicted RBP16.62■□□□□ 0.25
SMYD1-201ENST00000419482 UBTFP17480 764 aaKnown RBP16.61■□□□□ 0.25
SMYD1-201ENST00000419482 YTHDC1Q96MU7 727 aaKnown RBP16.47■□□□□ 0.23
SMYD1-201ENST00000419482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.38■□□□□ 0.21
SMYD1-201ENST00000419482 ZCCHC6Q5VYS8 1495 aaKnown RBP16.29■□□□□ 0.2
SMYD1-201ENST00000419482 HNRNPUL2Q1KMD3 747 aaKnown RBP16.24■□□□□ 0.19
SMYD1-201ENST00000419482 DIEXFQ68CQ4 756 aaKnown RBP16.21■□□□□ 0.19
SMYD1-201ENST00000419482 ERICH6Q7L0X2 663 aa16.21■□□□□ 0.19
SMYD1-201ENST00000419482 ATP1B4Q9UN42 357 aaPredicted RBP16.2■□□□□ 0.18
SMYD1-201ENST00000419482 MYO15BQ96JP2 1530 aa16.2■□□□□ 0.18
SMYD1-201ENST00000419482 DCAF1Q9Y4B6 1507 aa16.12■□□□□ 0.17
SMYD1-201ENST00000419482 ITGAEP38570 1179 aa16.07■□□□□ 0.16
SMYD1-201ENST00000419482 ABCC9O60706 1549 aa16.04■□□□□ 0.16
SMYD1-201ENST00000419482 GTF3C3Q9Y5Q9 886 aa16.02■□□□□ 0.16
SMYD1-201ENST00000419482 NEFLP07196 543 aa15.98■□□□□ 0.15
SMYD1-201ENST00000419482 ACIN1Q9UKV3 1341 aaKnown RBP15.92■□□□□ 0.14
SMYD1-201ENST00000419482 CCDC180Q9P1Z9 1646 aa15.9■□□□□ 0.14
SMYD1-201ENST00000419482 PABPN1Q86U42 306 aaKnown RBP eCLIP15.88■□□□□ 0.13
SMYD1-201ENST00000419482 ZNF316A6NFI3 1004 aaPredicted RBP15.87■□□□□ 0.13
SMYD1-201ENST00000419482 SCRIBQ14160 1630 aa15.85■□□□□ 0.13
SMYD1-201ENST00000419482 CSRNP3Q8WYN3 585 aa15.84■□□□□ 0.13
SMYD1-201ENST00000419482 SCAF1Q9H7N4 1312 aaKnown RBP15.78■□□□□ 0.12
SMYD1-201ENST00000419482 NEUROD1Q13562 356 aa15.74■□□□□ 0.11
SMYD1-201ENST00000419482 RSF1Q96T23 1441 aaPredicted RBP15.72■□□□□ 0.11
SMYD1-201ENST00000419482 FAM50AQ14320 339 aaKnown RBP15.66■□□□□ 0.1
SMYD1-201ENST00000419482 BCANQ96GW7 911 aa15.61■□□□□ 0.09
SMYD1-201ENST00000419482 CNGB1Q14028 1251 aaPredicted RBP15.58■□□□□ 0.08
SMYD1-201ENST00000419482 POLR3GLQ9BT43 218 aa15.57■□□□□ 0.08
SMYD1-201ENST00000419482 MIER1Q8N108 512 aa15.5■□□□□ 0.07
SMYD1-201ENST00000419482 ANP32CO43423 234 aa15.45■□□□□ 0.06
SMYD1-201ENST00000419482 P3H3Q8IVL6 736 aa15.44■□□□□ 0.06
SMYD1-201ENST00000419482 CEP162Q5TB80 1403 aa15.44■□□□□ 0.06
SMYD1-201ENST00000419482 TRIM52Q96A61 297 aa15.41■□□□□ 0.06
SMYD1-201ENST00000419482 RB1CC1Q8TDY2 1594 aa15.39■□□□□ 0.05
SMYD1-201ENST00000419482 CECR2Q9BXF3 1484 aa15.39■□□□□ 0.05
SMYD1-201ENST00000419482 CLIP1P30622 1438 aa15.36■□□□□ 0.05
SMYD1-201ENST00000419482 RTL5Q5HYW3 569 aaPredicted RBP15.34■□□□□ 0.05
SMYD1-201ENST00000419482 DDX10Q13206 875 aaKnown RBP15.34■□□□□ 0.05
SMYD1-201ENST00000419482 TNIKQ9UKE5 1360 aa15.32■□□□□ 0.04
SMYD1-201ENST00000419482 FKBP8Q14318 412 aa15.31■□□□□ 0.04
SMYD1-201ENST00000419482 EEA1Q15075 1411 aa15.29■□□□□ 0.04
SMYD1-201ENST00000419482 GOLGA3Q08378 1498 aa15.28■□□□□ 0.04
SMYD1-201ENST00000419482 CLSPNQ9HAW4 1339 aa15.28■□□□□ 0.04
SMYD1-201ENST00000419482 CDK11AQ9UQ88 783 aaPredicted RBP15.26■□□□□ 0.03
SMYD1-201ENST00000419482 BCL11AQ9H165 835 aa15.25■□□□□ 0.03
SMYD1-201ENST00000419482 WRNQ14191 1432 aaPredicted RBP eCLIP15.23■□□□□ 0.03
SMYD1-201ENST00000419482 SOGA1O94964 1423 aa15.23■□□□□ 0.03
SMYD1-201ENST00000419482 ZNF326Q5BKZ1 582 aaKnown RBP15.22■□□□□ 0.03
SMYD1-201ENST00000419482 NACADO15069 1562 aa15.22■□□□□ 0.03
SMYD1-201ENST00000419482 MROH2BQ7Z745 1585 aa15.21■□□□□ 0.03
SMYD1-201ENST00000419482 HIRIP3Q9BW71 556 aaPredicted RBP15.2■□□□□ 0.02
SMYD1-201ENST00000419482 ARID3CA6NKF2 412 aa15.2■□□□□ 0.02
SMYD1-201ENST00000419482 DAXXQ9UER7 740 aaPredicted RBP15.19■□□□□ 0.02
SMYD1-201ENST00000419482 TONSLQ96HA7 1378 aa15.18■□□□□ 0.02
SMYD1-201ENST00000419482 HNRNPUQ00839 825 aaKnown RBP eCLIP15.15■□□□□ 0.02
SMYD1-201ENST00000419482 BAZ1AQ9NRL2 1556 aaPredicted RBP15.15■□□□□ 0.02
SMYD1-201ENST00000419482 ANP32EQ9BTT0 268 aa15.14■□□□□ 0.01
SMYD1-201ENST00000419482 CEP164Q9UPV0 1460 aa15.14■□□□□ 0.01
SMYD1-201ENST00000419482 CCDC88BA6NC98 1476 aa15.12■□□□□ 0.01
SMYD1-201ENST00000419482 EIF5BO60841 1220 aaKnown RBP15.12■□□□□ 0.01
SMYD1-201ENST00000419482 ABCC8Q09428 1581 aa15.11■□□□□ 0.01
SMYD1-201ENST00000419482 MYT1LQ9UL68 1186 aa15.11■□□□□ 0.01
SMYD1-201ENST00000419482 FAM9BQ8IZU0 186 aa15.06■□□□□ 0
SMYD1-201ENST00000419482 CHIC2Q9UKJ5 165 aa15.06■□□□□ 0
SMYD1-201ENST00000419482 WIZO95785 1651 aa15.02□□□□□ -0.01
SMYD1-201ENST00000419482 IRX6P78412 446 aaPredicted RBP15.02□□□□□ -0.01
SMYD1-201ENST00000419482 SUPT16HQ9Y5B9 1047 aaKnown RBP15.01□□□□□ -0.01
SMYD1-201ENST00000419482 SIN3AQ96ST3 1273 aa15□□□□□ -0.01
SMYD1-201ENST00000419482 FBLN2P98095 1184 aa14.99□□□□□ -0.01
SMYD1-201ENST00000419482 BAZ1BQ9UIG0 1483 aaKnown RBP14.99□□□□□ -0.01
SMYD1-201ENST00000419482 ZNF777Q9ULD5 760 aaPredicted RBP14.99□□□□□ -0.01
SMYD1-201ENST00000419482 VPS8Q8N3P4 1428 aa14.98□□□□□ -0.01
SMYD1-201ENST00000419482 MTUS2Q5JR59 1369 aa14.98□□□□□ -0.01
SMYD1-201ENST00000419482 KANK4Q5T7N3 995 aaPredicted RBP14.95□□□□□ -0.02
SMYD1-201ENST00000419482 SLC4A1APQ9BWU0 796 aaKnown RBP14.95□□□□□ -0.02
SMYD1-201ENST00000419482 KIF27Q86VH2 1401 aa14.95□□□□□ -0.02
SMYD1-201ENST00000419482 MRS2Q9HD23 443 aa14.93□□□□□ -0.02
SMYD1-201ENST00000419482 CCNB3Q8WWL7 1395 aa14.92□□□□□ -0.02
SMYD1-201ENST00000419482 RRP7BPQ9NSQ0 103 aa14.92□□□□□ -0.02
SMYD1-201ENST00000419482 ANP32AP39687 249 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms