RNA–Protein interactions for RNA: ENST00000389609.8

CCDC149-202, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC149, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-202ENST00000389609 NISCHQ9Y2I1 1504 aa23.4■■□□□ 1.34
CCDC149-202ENST00000389609 CCDC180Q9P1Z9 1646 aa20.05■□□□□ 0.8
CCDC149-202ENST00000389609 ZCCHC6Q5VYS8 1495 aaKnown RBP19.88■□□□□ 0.77
CCDC149-202ENST00000389609 SHROOM4Q9ULL8 1493 aa19.7■□□□□ 0.74
CCDC149-202ENST00000389609 DCAF1Q9Y4B6 1507 aa19.48■□□□□ 0.71
CCDC149-202ENST00000389609 SUPT5HO00267 1087 aaKnown RBP19.33■□□□□ 0.69
CCDC149-202ENST00000389609 DCAF8L2P0C7V8 631 aa19.19■□□□□ 0.66
CCDC149-202ENST00000389609 CHIC1Q5VXU3 224 aa19.01■□□□□ 0.63
CCDC149-202ENST00000389609 MYO15BQ96JP2 1530 aa18.94■□□□□ 0.62
CCDC149-202ENST00000389609 ABCC9O60706 1549 aa18.79■□□□□ 0.6
CCDC149-202ENST00000389609 HRCP23327 699 aa18.75■□□□□ 0.59
CCDC149-202ENST00000389609 SCRIBQ14160 1630 aa18.51■□□□□ 0.55
CCDC149-202ENST00000389609 RSF1Q96T23 1441 aaPredicted RBP18.48■□□□□ 0.55
CCDC149-202ENST00000389609 PELP1Q8IZL8 1130 aaKnown RBP18.45■□□□□ 0.54
CCDC149-202ENST00000389609 NACADO15069 1562 aa18.44■□□□□ 0.54
CCDC149-202ENST00000389609 PCGF6Q9BYE7 350 aa18.44■□□□□ 0.54
CCDC149-202ENST00000389609 RB1CC1Q8TDY2 1594 aa18.44■□□□□ 0.54
CCDC149-202ENST00000389609 LOC105371045A0A1W2PR82 267 aa18.29■□□□□ 0.52
CCDC149-202ENST00000389609 TRIM26Q12899 539 aaPredicted RBP18.28■□□□□ 0.52
CCDC149-202ENST00000389609 PPARGC1BQ86YN6 1023 aaKnown RBP18.23■□□□□ 0.51
CCDC149-202ENST00000389609 CECR2Q9BXF3 1484 aa18.17■□□□□ 0.5
CCDC149-202ENST00000389609 ZEB1P37275 1124 aaPredicted RBP18.13■□□□□ 0.49
CCDC149-202ENST00000389609 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
CCDC149-202ENST00000389609 MROH2BQ7Z745 1585 aa18.09■□□□□ 0.49
CCDC149-202ENST00000389609 BAZ1AQ9NRL2 1556 aaPredicted RBP18.07■□□□□ 0.48
CCDC149-202ENST00000389609 EIF4G1Q04637 1599 aaKnown RBP17.99■□□□□ 0.47
CCDC149-202ENST00000389609 WIZO95785 1651 aa17.97■□□□□ 0.47
CCDC149-202ENST00000389609 TOP2AP11388 1531 aaKnown RBP17.87■□□□□ 0.45
CCDC149-202ENST00000389609 FAM9AQ8IZU1 332 aaPredicted RBP17.84■□□□□ 0.45
CCDC149-202ENST00000389609 SCAF1Q9H7N4 1312 aaKnown RBP17.82■□□□□ 0.44
CCDC149-202ENST00000389609 MYT1Q01538 1121 aa17.81■□□□□ 0.44
CCDC149-202ENST00000389609 SMARCA4P51532 1647 aa17.79■□□□□ 0.44
CCDC149-202ENST00000389609 UNC13AQ9UPW8 1703 aa17.77■□□□□ 0.44
CCDC149-202ENST00000389609 EEA1Q15075 1411 aa17.73■□□□□ 0.43
CCDC149-202ENST00000389609 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
CCDC149-202ENST00000389609 SMARCA2P51531 1590 aa17.7■□□□□ 0.42
CCDC149-202ENST00000389609 EHMT2Q96KQ7 1210 aa17.65■□□□□ 0.42
CCDC149-202ENST00000389609 CCDC88BA6NC98 1476 aa17.64■□□□□ 0.42
CCDC149-202ENST00000389609 PEG3Q9GZU2 1588 aa17.63■□□□□ 0.41
CCDC149-202ENST00000389609 BICRAQ9NZM4 1560 aa17.6■□□□□ 0.41
CCDC149-202ENST00000389609 TNIKQ9UKE5 1360 aa17.57■□□□□ 0.4
CCDC149-202ENST00000389609 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
CCDC149-202ENST00000389609 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
CCDC149-202ENST00000389609 CEP162Q5TB80 1403 aa17.48■□□□□ 0.39
CCDC149-202ENST00000389609 GOLGA3Q08378 1498 aa17.44■□□□□ 0.38
CCDC149-202ENST00000389609 KIF21BO75037 1637 aa17.39■□□□□ 0.38
CCDC149-202ENST00000389609 CSRNP3Q8WYN3 585 aa17.39■□□□□ 0.38
CCDC149-202ENST00000389609 SOGA1O94964 1423 aa17.38■□□□□ 0.37
CCDC149-202ENST00000389609 CEP164Q9UPV0 1460 aa17.35■□□□□ 0.37
CCDC149-202ENST00000389609 ACIN1Q9UKV3 1341 aaKnown RBP17.33■□□□□ 0.37
CCDC149-202ENST00000389609 BAZ1BQ9UIG0 1483 aaKnown RBP17.33■□□□□ 0.36
CCDC149-202ENST00000389609 CCER1Q8TC90 406 aaPredicted RBP17.32■□□□□ 0.36
CCDC149-202ENST00000389609 RUSC2Q8N2Y8 1516 aa17.31■□□□□ 0.36
CCDC149-202ENST00000389609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.3■□□□□ 0.36
CCDC149-202ENST00000389609 ATAD2BQ9ULI0 1458 aa17.29■□□□□ 0.36
CCDC149-202ENST00000389609 NEUROD1Q13562 356 aa17.24■□□□□ 0.35
CCDC149-202ENST00000389609 SYNJ1O43426 1573 aa17.23■□□□□ 0.35
CCDC149-202ENST00000389609 VPS8Q8N3P4 1428 aa17.17■□□□□ 0.34
CCDC149-202ENST00000389609 UBTFP17480 764 aaKnown RBP17.17■□□□□ 0.34
CCDC149-202ENST00000389609 TOP2BQ02880 1626 aa17.16■□□□□ 0.34
CCDC149-202ENST00000389609 GTF3C3Q9Y5Q9 886 aa17.15■□□□□ 0.34
CCDC149-202ENST00000389609 CLIP1P30622 1438 aa17.15■□□□□ 0.34
CCDC149-202ENST00000389609 BIVM-ERCC5R4GMW8 1640 aa17.14■□□□□ 0.33
CCDC149-202ENST00000389609 ERICH3Q5RHP9 1530 aa17.13■□□□□ 0.33
CCDC149-202ENST00000389609 TTBK1Q5TCY1 1321 aaPredicted RBP17.13■□□□□ 0.33
CCDC149-202ENST00000389609 DIEXFQ68CQ4 756 aaKnown RBP17.11■□□□□ 0.33
CCDC149-202ENST00000389609 CENPBP07199 599 aaPredicted RBP17.1■□□□□ 0.33
CCDC149-202ENST00000389609 HMGXB3Q12766 1538 aa17.09■□□□□ 0.33
CCDC149-202ENST00000389609 CLSPNQ9HAW4 1339 aa17.04■□□□□ 0.32
CCDC149-202ENST00000389609 ZNF316A6NFI3 1004 aaPredicted RBP17.03■□□□□ 0.32
CCDC149-202ENST00000389609 RAPGEF2Q9Y4G8 1499 aa17.02■□□□□ 0.31
CCDC149-202ENST00000389609 PRXQ9BXM0 1461 aa17.01■□□□□ 0.31
CCDC149-202ENST00000389609 NCAPD3P42695 1498 aa17.01■□□□□ 0.31
CCDC149-202ENST00000389609 APLP2Q06481 763 aa16.95■□□□□ 0.3
CCDC149-202ENST00000389609 KIF27Q86VH2 1401 aa16.87■□□□□ 0.29
CCDC149-202ENST00000389609 CFTRP13569 1480 aa16.87■□□□□ 0.29
CCDC149-202ENST00000389609 ARAP1Q96P48 1450 aa16.87■□□□□ 0.29
CCDC149-202ENST00000389609 CUX2O14529 1486 aa16.86■□□□□ 0.29
CCDC149-202ENST00000389609 PRDM2Q13029 1718 aa16.85■□□□□ 0.29
CCDC149-202ENST00000389609 RRBP1Q9P2E9 1410 aaKnown RBP16.84■□□□□ 0.29
CCDC149-202ENST00000389609 CUX1P39880 1505 aa16.84■□□□□ 0.29
CCDC149-202ENST00000389609 HNRNPUL2Q1KMD3 747 aaKnown RBP16.83■□□□□ 0.28
CCDC149-202ENST00000389609 MAP3K1Q13233 1512 aa16.82■□□□□ 0.28
CCDC149-202ENST00000389609 RANGAP1P46060 587 aaPredicted RBP16.76■□□□□ 0.27
CCDC149-202ENST00000389609 DHX57Q6P158 1386 aaKnown RBP16.74■□□□□ 0.27
CCDC149-202ENST00000389609 ARHGAP35Q9NRY4 1499 aa16.7■□□□□ 0.26
CCDC149-202ENST00000389609 CCNB3Q8WWL7 1395 aa16.66■□□□□ 0.26
CCDC149-202ENST00000389609 MIER1Q8N108 512 aa16.63■□□□□ 0.25
CCDC149-202ENST00000389609 CADPSQ9ULU8 1353 aa16.63■□□□□ 0.25
CCDC149-202ENST00000389609 TIAM1Q13009 1591 aa16.62■□□□□ 0.25
CCDC149-202ENST00000389609 YTHDC1Q96MU7 727 aaKnown RBP16.6■□□□□ 0.25
CCDC149-202ENST00000389609 IGF1RP08069 1367 aa16.59■□□□□ 0.25
CCDC149-202ENST00000389609 KANK4Q5T7N3 995 aaPredicted RBP16.59■□□□□ 0.25
CCDC149-202ENST00000389609 FHAD1B1AJZ9 1412 aa16.58■□□□□ 0.25
CCDC149-202ENST00000389609 CC2D2AQ9P2K1 1620 aa16.56■□□□□ 0.24
CCDC149-202ENST00000389609 CFAP43Q8NDM7 1665 aa16.55■□□□□ 0.24
CCDC149-202ENST00000389609 BCL11AQ9H165 835 aa16.55■□□□□ 0.24
CCDC149-202ENST00000389609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.54■□□□□ 0.24
CCDC149-202ENST00000389609 EFCAB5A4FU69 1503 aa16.52■□□□□ 0.24
CCDC149-202ENST00000389609 CARMIL1Q5VZK9 1371 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms