RNA–Protein interactions for RNA: ENST00000398610.2

PCDHGA10-201, Transcript of protocadherin gamma subfamily A, 10, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA10, Length 4,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA10-201ENST00000398610 NISCHQ9Y2I1 1504 aa20.28■□□□□ 0.84
PCDHGA10-201ENST00000398610 DCAF8L2P0C7V8 631 aa19.15■□□□□ 0.66
PCDHGA10-201ENST00000398610 SUPT5HO00267 1087 aaKnown RBP17.94■□□□□ 0.46
PCDHGA10-201ENST00000398610 SHROOM4Q9ULL8 1493 aa17.75■□□□□ 0.43
PCDHGA10-201ENST00000398610 EHMT2Q96KQ7 1210 aa17.62■□□□□ 0.41
PCDHGA10-201ENST00000398610 MYT1Q01538 1121 aa17.22■□□□□ 0.35
PCDHGA10-201ENST00000398610 PELP1Q8IZL8 1130 aaKnown RBP17.14■□□□□ 0.33
PCDHGA10-201ENST00000398610 CCDC180Q9P1Z9 1646 aa17.1■□□□□ 0.33
PCDHGA10-201ENST00000398610 ZCCHC6Q5VYS8 1495 aaKnown RBP17.07■□□□□ 0.32
PCDHGA10-201ENST00000398610 FAM9AQ8IZU1 332 aaPredicted RBP17.02■□□□□ 0.31
PCDHGA10-201ENST00000398610 TTBK1Q5TCY1 1321 aaPredicted RBP16.9■□□□□ 0.3
PCDHGA10-201ENST00000398610 RANGAP1P46060 587 aaPredicted RBP16.79■□□□□ 0.28
PCDHGA10-201ENST00000398610 APLP2Q06481 763 aa16.62■□□□□ 0.25
PCDHGA10-201ENST00000398610 CHIC1Q5VXU3 224 aa16.61■□□□□ 0.25
PCDHGA10-201ENST00000398610 PCGF6Q9BYE7 350 aa16.47■□□□□ 0.23
PCDHGA10-201ENST00000398610 ATP1B4Q9UN42 357 aaPredicted RBP16.47■□□□□ 0.23
PCDHGA10-201ENST00000398610 DCAF1Q9Y4B6 1507 aa16.45■□□□□ 0.22
PCDHGA10-201ENST00000398610 ABCC9O60706 1549 aa16.44■□□□□ 0.22
PCDHGA10-201ENST00000398610 TRIM41Q8WV44 630 aa16.4■□□□□ 0.22
PCDHGA10-201ENST00000398610 SCRIBQ14160 1630 aa16.34■□□□□ 0.21
PCDHGA10-201ENST00000398610 MYO15BQ96JP2 1530 aa16.31■□□□□ 0.2
PCDHGA10-201ENST00000398610 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
PCDHGA10-201ENST00000398610 UBTFP17480 764 aaKnown RBP16.28■□□□□ 0.2
PCDHGA10-201ENST00000398610 LOC105371045A0A1W2PR82 267 aa16.25■□□□□ 0.19
PCDHGA10-201ENST00000398610 HRCP23327 699 aa16.16■□□□□ 0.18
PCDHGA10-201ENST00000398610 RSF1Q96T23 1441 aaPredicted RBP16.08■□□□□ 0.17
PCDHGA10-201ENST00000398610 CCER1Q8TC90 406 aaPredicted RBP16.07■□□□□ 0.16
PCDHGA10-201ENST00000398610 NACADO15069 1562 aa15.99■□□□□ 0.15
PCDHGA10-201ENST00000398610 CENPBP07199 599 aaPredicted RBP15.92■□□□□ 0.14
PCDHGA10-201ENST00000398610 ITGAEP38570 1179 aa15.92■□□□□ 0.14
PCDHGA10-201ENST00000398610 CECR2Q9BXF3 1484 aa15.91■□□□□ 0.14
PCDHGA10-201ENST00000398610 ZEB1P37275 1124 aaPredicted RBP15.9■□□□□ 0.14
PCDHGA10-201ENST00000398610 PABPN1Q86U42 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
PCDHGA10-201ENST00000398610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.88■□□□□ 0.13
PCDHGA10-201ENST00000398610 HNRNPUL2Q1KMD3 747 aaKnown RBP15.88■□□□□ 0.13
PCDHGA10-201ENST00000398610 ERICH6Q7L0X2 663 aa15.88■□□□□ 0.13
PCDHGA10-201ENST00000398610 RB1CC1Q8TDY2 1594 aa15.87■□□□□ 0.13
PCDHGA10-201ENST00000398610 TRIM26Q12899 539 aaPredicted RBP15.83■□□□□ 0.13
PCDHGA10-201ENST00000398610 MROH2BQ7Z745 1585 aa15.8■□□□□ 0.12
PCDHGA10-201ENST00000398610 MYT1LQ9UL68 1186 aa15.8■□□□□ 0.12
PCDHGA10-201ENST00000398610 YTHDC1Q96MU7 727 aaKnown RBP15.77■□□□□ 0.11
PCDHGA10-201ENST00000398610 CNGB1Q14028 1251 aaPredicted RBP15.73■□□□□ 0.11
PCDHGA10-201ENST00000398610 WIZO95785 1651 aa15.68■□□□□ 0.1
PCDHGA10-201ENST00000398610 POLR3GLQ9BT43 218 aa15.66■□□□□ 0.1
PCDHGA10-201ENST00000398610 BAZ1AQ9NRL2 1556 aaPredicted RBP15.63■□□□□ 0.09
PCDHGA10-201ENST00000398610 NEFLP07196 543 aa15.49■□□□□ 0.07
PCDHGA10-201ENST00000398610 FBLN2P98095 1184 aa15.45■□□□□ 0.06
PCDHGA10-201ENST00000398610 CCDC88BA6NC98 1476 aa15.44■□□□□ 0.06
PCDHGA10-201ENST00000398610 SMARCA4P51532 1647 aa15.44■□□□□ 0.06
PCDHGA10-201ENST00000398610 TOP2AP11388 1531 aaKnown RBP15.42■□□□□ 0.06
PCDHGA10-201ENST00000398610 ABCC8Q09428 1581 aa15.42■□□□□ 0.06
PCDHGA10-201ENST00000398610 ARID3CA6NKF2 412 aa15.38■□□□□ 0.05
PCDHGA10-201ENST00000398610 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
PCDHGA10-201ENST00000398610 FAM50AQ14320 339 aaKnown RBP15.34■□□□□ 0.05
PCDHGA10-201ENST00000398610 SLC4A1APQ9BWU0 796 aaKnown RBP15.33■□□□□ 0.04
PCDHGA10-201ENST00000398610 SMARCA2P51531 1590 aa15.3■□□□□ 0.04
PCDHGA10-201ENST00000398610 SOGA1O94964 1423 aa15.3■□□□□ 0.04
PCDHGA10-201ENST00000398610 P3H3Q8IVL6 736 aa15.29■□□□□ 0.04
PCDHGA10-201ENST00000398610 UNC13AQ9UPW8 1703 aa15.28■□□□□ 0.04
PCDHGA10-201ENST00000398610 WRNQ14191 1432 aaPredicted RBP eCLIP15.25■□□□□ 0.03
PCDHGA10-201ENST00000398610 DAXXQ9UER7 740 aaPredicted RBP15.24■□□□□ 0.03
PCDHGA10-201ENST00000398610 BAZ1BQ9UIG0 1483 aaKnown RBP15.24■□□□□ 0.03
PCDHGA10-201ENST00000398610 CEP162Q5TB80 1403 aa15.23■□□□□ 0.03
PCDHGA10-201ENST00000398610 TRIM52Q96A61 297 aa15.22■□□□□ 0.03
PCDHGA10-201ENST00000398610 NEUROD1Q13562 356 aa15.21■□□□□ 0.03
PCDHGA10-201ENST00000398610 BICRAQ9NZM4 1560 aa15.19■□□□□ 0.02
PCDHGA10-201ENST00000398610 SCAF1Q9H7N4 1312 aaKnown RBP15.19■□□□□ 0.02
PCDHGA10-201ENST00000398610 ZNF326Q5BKZ1 582 aaKnown RBP15.18■□□□□ 0.02
PCDHGA10-201ENST00000398610 EEA1Q15075 1411 aa15.17■□□□□ 0.02
PCDHGA10-201ENST00000398610 RUSC2Q8N2Y8 1516 aa15.17■□□□□ 0.02
PCDHGA10-201ENST00000398610 TNIKQ9UKE5 1360 aa15.15■□□□□ 0.02
PCDHGA10-201ENST00000398610 ATAD2BQ9ULI0 1458 aa15.15■□□□□ 0.02
PCDHGA10-201ENST00000398610 EIF4G1Q04637 1599 aaKnown RBP15.14■□□□□ 0.01
PCDHGA10-201ENST00000398610 GOLGA3Q08378 1498 aa15.13■□□□□ 0.01
PCDHGA10-201ENST00000398610 SLC24A1O60721 1099 aa15.09■□□□□ 0.01
PCDHGA10-201ENST00000398610 CEP164Q9UPV0 1460 aa15.03■□□□□ -0
PCDHGA10-201ENST00000398610 CLIP1P30622 1438 aa15.03■□□□□ -0
PCDHGA10-201ENST00000398610 ZNF777Q9ULD5 760 aaPredicted RBP15.02■□□□□ -0
PCDHGA10-201ENST00000398610 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
PCDHGA10-201ENST00000398610 CLSPNQ9HAW4 1339 aa14.99□□□□□ -0.01
PCDHGA10-201ENST00000398610 DIEXFQ68CQ4 756 aaKnown RBP14.99□□□□□ -0.01
PCDHGA10-201ENST00000398610 SYNJ1O43426 1573 aa14.97□□□□□ -0.01
PCDHGA10-201ENST00000398610 PEG3Q9GZU2 1588 aa14.96□□□□□ -0.01
PCDHGA10-201ENST00000398610 BCL11AQ9H165 835 aa14.91□□□□□ -0.02
PCDHGA10-201ENST00000398610 RAPGEF2Q9Y4G8 1499 aa14.91□□□□□ -0.02
PCDHGA10-201ENST00000398610 BCANQ96GW7 911 aa14.91□□□□□ -0.02
PCDHGA10-201ENST00000398610 ACIN1Q9UKV3 1341 aaKnown RBP14.88□□□□□ -0.03
PCDHGA10-201ENST00000398610 VPS8Q8N3P4 1428 aa14.84□□□□□ -0.03
PCDHGA10-201ENST00000398610 KIF27Q86VH2 1401 aa14.83□□□□□ -0.03
PCDHGA10-201ENST00000398610 NCAPD3P42695 1498 aa14.82□□□□□ -0.04
PCDHGA10-201ENST00000398610 GTF3C3Q9Y5Q9 886 aa14.81□□□□□ -0.04
PCDHGA10-201ENST00000398610 ZNF316A6NFI3 1004 aaPredicted RBP14.8□□□□□ -0.04
PCDHGA10-201ENST00000398610 KIF21BO75037 1637 aa14.8□□□□□ -0.04
PCDHGA10-201ENST00000398610 SENP3Q9H4L4 574 aaPredicted RBP14.79□□□□□ -0.04
PCDHGA10-201ENST00000398610 CHGAP10645 457 aaKnown RBP14.78□□□□□ -0.04
PCDHGA10-201ENST00000398610 TOP2BQ02880 1626 aa14.76□□□□□ -0.05
PCDHGA10-201ENST00000398610 CHIC2Q9UKJ5 165 aa14.76□□□□□ -0.05
PCDHGA10-201ENST00000398610 RTL5Q5HYW3 569 aaPredicted RBP14.74□□□□□ -0.05
PCDHGA10-201ENST00000398610 HMGXB3Q12766 1538 aa14.74□□□□□ -0.05
PCDHGA10-201ENST00000398610 CUX2O14529 1486 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms