Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC17.23■□□□□ 0.35
TPM2P07951 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TPM2P07951 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TPM2P07951 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TPM2P07951 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC17.23■□□□□ 0.35
TPM2P07951 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TPM2P07951 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TPM2P07951 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.23■□□□□ 0.35
TPM2P07951 AZGP1P1-201ENST00000411909 902 ntBASIC17.23■□□□□ 0.35
TPM2P07951 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.23■□□□□ 0.35
TPM2P07951 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.23■□□□□ 0.35
TPM2P07951 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TPM2P07951 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TPM2P07951 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 AP001267.2-201ENST00000532619 2086 ntBASIC17.23■□□□□ 0.35
TPM2P07951 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TPM2P07951 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TPM2P07951 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TPM2P07951 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.22■□□□□ 0.35
TPM2P07951 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TPM2P07951 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TPM2P07951 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TPM2P07951 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC17.22■□□□□ 0.35
TPM2P07951 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC17.22■□□□□ 0.35
TPM2P07951 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.22■□□□□ 0.35
TPM2P07951 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.22■□□□□ 0.35
TPM2P07951 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 FO393414.2-201ENST00000405153 598 ntBASIC17.22■□□□□ 0.35
TPM2P07951 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.22■□□□□ 0.35
TPM2P07951 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.22■□□□□ 0.35
TPM2P07951 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.22■□□□□ 0.35
TPM2P07951 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TPM2P07951 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TPM2P07951 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TPM2P07951 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.22■□□□□ 0.35
TPM2P07951 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TPM2P07951 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC17.22■□□□□ 0.35
TPM2P07951 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TPM2P07951 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TPM2P07951 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TPM2P07951 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TPM2P07951 AC114271.1-201ENST00000612689 2813 ntBASIC17.21■□□□□ 0.35
TPM2P07951 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC17.21■□□□□ 0.35
TPM2P07951 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
TPM2P07951 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM2P07951 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC17.21■□□□□ 0.35
TPM2P07951 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM2P07951 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM2P07951 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM2P07951 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.21■□□□□ 0.35
TPM2P07951 DMBT1P1-203ENST00000636837 4628 ntBASIC17.21■□□□□ 0.35
TPM2P07951 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.21■□□□□ 0.35
TPM2P07951 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM2P07951 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM2P07951 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM2P07951 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPM2P07951 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TPM2P07951 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TPM2P07951 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.21■□□□□ 0.35
TPM2P07951 KRT18P32-201ENST00000424695 1287 ntBASIC17.21■□□□□ 0.35
TPM2P07951 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.21■□□□□ 0.35
TPM2P07951 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.21■□□□□ 0.35
TPM2P07951 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
TPM2P07951 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TPM2P07951 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TPM2P07951 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms