Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.16□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.16□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.16□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC13.16□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 Z83836.1-201ENST00000624605 1642 ntBASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC083849.1-201ENST00000615227 514 ntBASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC135782.3-201ENST00000562782 2105 ntBASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC13.15□□□□□ -0.3
BOLA2-SMG1P6H3BVE0 AC087164.2-201ENST00000624514 3130 ntBASIC13.15□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC13.15□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC13.15□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms