Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.79□□□□□ -0.04
VGLL3A8MV65 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VGLL3A8MV65 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.79□□□□□ -0.04
VGLL3A8MV65 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
VGLL3A8MV65 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.79□□□□□ -0.04
VGLL3A8MV65 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VGLL3A8MV65 AC008687.5-201ENST00000593746 558 ntBASIC14.79□□□□□ -0.04
VGLL3A8MV65 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
VGLL3A8MV65 KRT89P-201ENST00000620027 1478 ntBASIC14.79□□□□□ -0.04
VGLL3A8MV65 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
VGLL3A8MV65 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VGLL3A8MV65 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
VGLL3A8MV65 PAK1-202ENST00000356341 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VGLL3A8MV65 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
VGLL3A8MV65 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
VGLL3A8MV65 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.79□□□□□ -0.04
VGLL3A8MV65 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VGLL3A8MV65 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 CDRT4-204ENST00000619038 2498 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 PCGF3-213ENST00000620529 1899 ntBASIC14.78□□□□□ -0.04
VGLL3A8MV65 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.78□□□□□ -0.04
VGLL3A8MV65 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 EPHB6-201ENST00000411471 3367 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 TMEM8B-201ENST00000377988 3731 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 MED29-207ENST00000615911 3565 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 AC092028.1-202ENST00000641483 3547 ntBASIC14.78□□□□□ -0.04
VGLL3A8MV65 AC092028.1-201ENST00000641781 3540 ntBASIC14.78□□□□□ -0.04
VGLL3A8MV65 LINC00365-201ENST00000413591 2618 ntTSL 3 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.78□□□□□ -0.04
VGLL3A8MV65 NUAK2-201ENST00000367157 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VGLL3A8MV65 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
VGLL3A8MV65 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC14.77□□□□□ -0.04
VGLL3A8MV65 CYP26B1-202ENST00000412253 4025 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VGLL3A8MV65 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.77□□□□□ -0.04
VGLL3A8MV65 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VGLL3A8MV65 UBE2L3-201ENST00000342192 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VGLL3A8MV65 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
VGLL3A8MV65 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VGLL3A8MV65 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VGLL3A8MV65 AVIL-201ENST00000257861 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VGLL3A8MV65 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.77□□□□□ -0.04
VGLL3A8MV65 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VGLL3A8MV65 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.77□□□□□ -0.04
VGLL3A8MV65 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC14.77□□□□□ -0.04
VGLL3A8MV65 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VGLL3A8MV65 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.77□□□□□ -0.04
VGLL3A8MV65 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
VGLL3A8MV65 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
VGLL3A8MV65 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.77□□□□□ -0.04
VGLL3A8MV65 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VGLL3A8MV65 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VGLL3A8MV65 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VGLL3A8MV65 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.77□□□□□ -0.05
VGLL3A8MV65 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
VGLL3A8MV65 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
VGLL3A8MV65 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VGLL3A8MV65 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
VGLL3A8MV65 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms