Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC66A2RUB6 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 AC084364.1-201ENST00000551967 1556 ntBASIC16.43■□□□□ 0.22
CCDC66A2RUB6 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 KRT18P13-201ENST00000400056 1290 ntBASIC16.43■□□□□ 0.22
CCDC66A2RUB6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 AC005237.2-201ENST00000434368 219 ntBASIC16.43■□□□□ 0.22
CCDC66A2RUB6 ALG1L5P-201ENST00000482043 771 ntBASIC16.43■□□□□ 0.22
CCDC66A2RUB6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 AC006538.3-201ENST00000612495 578 ntBASIC16.43■□□□□ 0.22
CCDC66A2RUB6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC66A2RUB6 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 WASH3P-207ENST00000560956 1394 ntBASIC16.42■□□□□ 0.22
CCDC66A2RUB6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 FO538757.1-201ENST00000623083 1397 ntBASIC16.42■□□□□ 0.22
CCDC66A2RUB6 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 HIST3H2BA-201ENST00000436555 524 ntBASIC16.42■□□□□ 0.22
CCDC66A2RUB6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 AC092865.5-201ENST00000545435 363 ntBASIC16.42■□□□□ 0.22
CCDC66A2RUB6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC66A2RUB6 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms