Protein–RNA interactions for Protein: A0A183

LCE6A, Late cornified envelope protein 6A, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE6AA0A183 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LCE6AA0A183 Z98259.2-201ENST00000641583 609 ntBASIC10.2□□□□□ -0.78
LCE6AA0A183 AL645728.2-202ENST00000641679 227 ntBASIC10.2□□□□□ -0.78
LCE6AA0A183 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LCE6AA0A183 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
LCE6AA0A183 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LCE6AA0A183 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LCE6AA0A183 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LCE6AA0A183 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LCE6AA0A183 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LCE6AA0A183 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LCE6AA0A183 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC10.19□□□□□ -0.78
LCE6AA0A183 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC10.19□□□□□ -0.78
LCE6AA0A183 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
LCE6AA0A183 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC10.19□□□□□ -0.78
LCE6AA0A183 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC10.19□□□□□ -0.78
LCE6AA0A183 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC10.19□□□□□ -0.78
LCE6AA0A183 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC10.19□□□□□ -0.78
LCE6AA0A183 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 RAN-210ENST00000541630 1475 ntTSL 2 BASIC10.19□□□□□ -0.78
LCE6AA0A183 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 KRT8P31-201ENST00000504812 1408 ntBASIC10.19□□□□□ -0.78
LCE6AA0A183 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC10.19□□□□□ -0.78
LCE6AA0A183 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
LCE6AA0A183 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
LCE6AA0A183 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
LCE6AA0A183 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC10.19□□□□□ -0.78
LCE6AA0A183 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
LCE6AA0A183 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC10.19□□□□□ -0.78
LCE6AA0A183 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
LCE6AA0A183 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC10.19□□□□□ -0.78
LCE6AA0A183 RN7SL494P-201ENST00000461517 304 ntBASIC10.19□□□□□ -0.78
LCE6AA0A183 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 AC023906.1-201ENST00000486386 453 ntBASIC10.19□□□□□ -0.78
LCE6AA0A183 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC10.19□□□□□ -0.78
LCE6AA0A183 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC10.19□□□□□ -0.78
LCE6AA0A183 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC10.19□□□□□ -0.78
LCE6AA0A183 EMC4-208ENST00000559078 599 ntTSL 3 BASIC10.19□□□□□ -0.78
LCE6AA0A183 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC10.19□□□□□ -0.78
LCE6AA0A183 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC10.19□□□□□ -0.78
LCE6AA0A183 MIR3188-201ENST00000583494 85 ntBASIC10.19□□□□□ -0.78
LCE6AA0A183 RPS5-204ENST00000598098 536 ntTSL 2 BASIC10.19□□□□□ -0.78
LCE6AA0A183 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC10.19□□□□□ -0.78
LCE6AA0A183 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
LCE6AA0A183 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
LCE6AA0A183 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
LCE6AA0A183 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC10.19□□□□□ -0.78
LCE6AA0A183 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC10.19□□□□□ -0.78
LCE6AA0A183 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC10.19□□□□□ -0.78
LCE6AA0A183 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 LRRFIP1P1-201ENST00000498774 2246 ntBASIC10.19□□□□□ -0.78
LCE6AA0A183 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC10.19□□□□□ -0.78
LCE6AA0A183 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC10.19□□□□□ -0.78
LCE6AA0A183 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 AC060834.1-201ENST00000443027 2032 ntBASIC10.19□□□□□ -0.78
LCE6AA0A183 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC10.19□□□□□ -0.78
LCE6AA0A183 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
LCE6AA0A183 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LCE6AA0A183 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCE6AA0A183 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCE6AA0A183 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCE6AA0A183 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCE6AA0A183 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
LCE6AA0A183 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LCE6AA0A183 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCE6AA0A183 POLL-206ENST00000370172 2308 ntTSL 2 BASIC10.18□□□□□ -0.78
LCE6AA0A183 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
LCE6AA0A183 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC10.18□□□□□ -0.78
LCE6AA0A183 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LCE6AA0A183 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
LCE6AA0A183 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
LCE6AA0A183 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LCE6AA0A183 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC10.18□□□□□ -0.78
LCE6AA0A183 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC10.18□□□□□ -0.78
LCE6AA0A183 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC10.18□□□□□ -0.78
LCE6AA0A183 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCE6AA0A183 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC10.18□□□□□ -0.78
LCE6AA0A183 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LCE6AA0A183 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LCE6AA0A183 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LCE6AA0A183 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms