Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 RN7SL769P-201ENST00000469386 295 ntBASIC15.59■□□□□ 0.09
YIPF1Q9Y548 RCC2P8-201ENST00000502779 1035 ntBASIC15.59■□□□□ 0.09
YIPF1Q9Y548 NUP210P1-202ENST00000504322 710 ntBASIC15.59■□□□□ 0.09
YIPF1Q9Y548 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 AC079328.1-201ENST00000560358 952 ntBASIC15.59■□□□□ 0.09
YIPF1Q9Y548 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 FGFR3P5-201ENST00000564496 886 ntBASIC15.59■□□□□ 0.09
YIPF1Q9Y548 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 AL132994.2-201ENST00000603120 687 ntBASIC15.59■□□□□ 0.09
YIPF1Q9Y548 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 AC015967.2-201ENST00000624092 234 ntBASIC15.59■□□□□ 0.09
YIPF1Q9Y548 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 AC006435.4-201ENST00000625037 234 ntBASIC15.59■□□□□ 0.09
YIPF1Q9Y548 AL356737.1-201ENST00000634391 234 ntBASIC15.59■□□□□ 0.09
YIPF1Q9Y548 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 PPT1-215ENST00000641471 2368 ntBASIC15.59■□□□□ 0.09
YIPF1Q9Y548 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 AC138035.3-201ENST00000622706 2791 ntBASIC15.59■□□□□ 0.09
YIPF1Q9Y548 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
YIPF1Q9Y548 KRT8P19-201ENST00000551916 1455 ntBASIC15.59■□□□□ 0.09
YIPF1Q9Y548 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.58■□□□□ 0.09
YIPF1Q9Y548 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
YIPF1Q9Y548 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
YIPF1Q9Y548 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.58■□□□□ 0.09
YIPF1Q9Y548 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.58■□□□□ 0.09
YIPF1Q9Y548 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
YIPF1Q9Y548 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
YIPF1Q9Y548 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 AL157791.1-201ENST00000553667 1699 ntBASIC15.58■□□□□ 0.08
YIPF1Q9Y548 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.58■□□□□ 0.08
YIPF1Q9Y548 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 SCARNA21-201ENST00000517026 139 ntBASIC15.58■□□□□ 0.08
YIPF1Q9Y548 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 AC009779.1-201ENST00000551138 283 ntBASIC15.58■□□□□ 0.08
YIPF1Q9Y548 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 AC009884.2-201ENST00000603110 324 ntBASIC15.58■□□□□ 0.08
YIPF1Q9Y548 AC027601.3-201ENST00000622907 509 ntBASIC15.58■□□□□ 0.08
YIPF1Q9Y548 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF1Q9Y548 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
YIPF1Q9Y548 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.57■□□□□ 0.08
YIPF1Q9Y548 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
YIPF1Q9Y548 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
YIPF1Q9Y548 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
YIPF1Q9Y548 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
YIPF1Q9Y548 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.57■□□□□ 0.08
YIPF1Q9Y548 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms