Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 AL023775.1-201ENST00000454907 1746 ntBASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
RPAP1Q9BWH6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 TPM3P8-201ENST00000330554 643 ntBASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 AKR7A2P1-201ENST00000460134 915 ntBASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 RNA5SP423-201ENST00000517127 109 ntBASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 AC020914.3-201ENST00000594712 304 ntBASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 LRRC59-203ENST00000576448 1531 ntBASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RPAP1Q9BWH6 AC140479.7-201ENST00000636301 2332 ntBASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 ACTG1P17-201ENST00000558391 1119 ntBASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.19■□□□□ 0.5
RPAP1Q9BWH6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 SLC25A24P2-201ENST00000415059 510 ntBASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 EIF3FP3-201ENST00000434851 1086 ntBASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
RPAP1Q9BWH6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms