Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 FTLP10-202ENST00000505798 471 ntBASIC12.51□□□□□ -0.41
GAFA1Q96PS6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 AL512343.1-201ENST00000605837 169 ntBASIC12.51□□□□□ -0.41
GAFA1Q96PS6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 AL138725.1-201ENST00000407347 1314 ntBASIC12.51□□□□□ -0.41
GAFA1Q96PS6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 AC126755.1-201ENST00000525846 6405 ntBASIC12.51□□□□□ -0.41
GAFA1Q96PS6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 AC023824.1-201ENST00000562945 2975 ntBASIC12.51□□□□□ -0.41
GAFA1Q96PS6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GAFA1Q96PS6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 RPL7P3-201ENST00000441388 714 ntBASIC12.5□□□□□ -0.41
GAFA1Q96PS6 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 AC138696.2-201ENST00000607376 223 ntBASIC12.5□□□□□ -0.41
GAFA1Q96PS6 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 FKBP4P6-201ENST00000457486 1332 ntBASIC12.5□□□□□ -0.41
GAFA1Q96PS6 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 AC011840.2-201ENST00000563063 1520 ntBASIC12.5□□□□□ -0.41
GAFA1Q96PS6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 MTHFR-210ENST00000641407 2387 ntBASIC12.5□□□□□ -0.41
GAFA1Q96PS6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
GAFA1Q96PS6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 RN7SKP230-201ENST00000365642 335 ntBASIC12.49□□□□□ -0.41
GAFA1Q96PS6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GAFA1Q96PS6 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms