Protein–RNA interactions for Protein: Q96JC9

EAF1, ELL-associated factor 1, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EAF1Q96JC9 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
EAF1Q96JC9 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
EAF1Q96JC9 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
EAF1Q96JC9 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
EAF1Q96JC9 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
EAF1Q96JC9 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
EAF1Q96JC9 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
EAF1Q96JC9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
EAF1Q96JC9 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 GHSR-202ENST00000427970 912 ntBASIC12.37□□□□□ -0.43
EAF1Q96JC9 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 ELK1P1-201ENST00000485699 580 ntBASIC12.37□□□□□ -0.43
EAF1Q96JC9 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 AC120045.2-201ENST00000567334 178 ntBASIC12.37□□□□□ -0.43
EAF1Q96JC9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 AC027307.3-201ENST00000594262 1100 ntBASIC12.37□□□□□ -0.43
EAF1Q96JC9 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 AC093813.1-201ENST00000605066 256 ntBASIC12.37□□□□□ -0.43
EAF1Q96JC9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
EAF1Q96JC9 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
EAF1Q96JC9 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
EAF1Q96JC9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
EAF1Q96JC9 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
EAF1Q96JC9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
EAF1Q96JC9 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
EAF1Q96JC9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
EAF1Q96JC9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.37□□□□□ -0.43
EAF1Q96JC9 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 C1QBPP1-201ENST00000400117 770 ntBASIC12.36□□□□□ -0.43
EAF1Q96JC9 RPS14P4-201ENST00000415880 418 ntBASIC12.36□□□□□ -0.43
EAF1Q96JC9 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 AC004066.1-201ENST00000502488 802 ntBASIC12.36□□□□□ -0.43
EAF1Q96JC9 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 AL359711.2-201ENST00000563105 872 ntBASIC12.36□□□□□ -0.43
EAF1Q96JC9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 CTBP2P3-201ENST00000585629 1255 ntBASIC12.36□□□□□ -0.43
EAF1Q96JC9 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 AC133539.2-201ENST00000604757 467 ntBASIC12.36□□□□□ -0.43
EAF1Q96JC9 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 FGD5P1-202ENST00000614866 2498 ntBASIC12.36□□□□□ -0.43
EAF1Q96JC9 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.36□□□□□ -0.43
EAF1Q96JC9 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
EAF1Q96JC9 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.36□□□□□ -0.43
EAF1Q96JC9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms