Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.85□□□□□ -0.51
MBD3L1Q8WWY6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
MBD3L1Q8WWY6 NME1-209ENST00000511355 1645 ntTSL 5 BASIC11.85□□□□□ -0.51
MBD3L1Q8WWY6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.85□□□□□ -0.51
MBD3L1Q8WWY6 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.85□□□□□ -0.51
MBD3L1Q8WWY6 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MBD3L1Q8WWY6 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MBD3L1Q8WWY6 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MBD3L1Q8WWY6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.85□□□□□ -0.51
MBD3L1Q8WWY6 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.85□□□□□ -0.51
MBD3L1Q8WWY6 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
MBD3L1Q8WWY6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
MBD3L1Q8WWY6 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC11.85□□□□□ -0.51
MBD3L1Q8WWY6 RN7SL832P-201ENST00000607781 1756 ntBASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 AC090643.2-201ENST00000623442 2029 ntBASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 TARDBPP1-201ENST00000442013 1203 ntBASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 AC008267.7-201ENST00000624570 1194 ntBASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 AC011840.2-201ENST00000563063 1520 ntBASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 AL360270.3-201ENST00000609118 1348 ntBASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
MBD3L1Q8WWY6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
MBD3L1Q8WWY6 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
MBD3L1Q8WWY6 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.51
MBD3L1Q8WWY6 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.51
MBD3L1Q8WWY6 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MBD3L1Q8WWY6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms