Protein–RNA interactions for Protein: Q8N6N3

C1orf52, UPF0690 protein C1orf52, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf52Q8N6N3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
C1orf52Q8N6N3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
C1orf52Q8N6N3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 KRT8P14-201ENST00000414254 1442 ntBASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 FAM207CP-201ENST00000443486 507 ntBASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 LINC02560-201ENST00000596379 459 ntBASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 TMEM261P1-201ENST00000604899 340 ntBASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C1orf52Q8N6N3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 BCRP1-201ENST00000444246 691 ntBASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 RN7SL204P-201ENST00000582831 262 ntBASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 AC133539.2-201ENST00000604757 467 ntBASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 AL096865.1-201ENST00000606796 927 ntBASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.44□□□□□ -0.1
C1orf52Q8N6N3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms