Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 ACKR1-201ENST00000368121 1240 ntBASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 ELK1P1-201ENST00000485699 580 ntBASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 TERF1P3-201ENST00000505638 1227 ntBASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 HNRNPA1P13-201ENST00000510646 963 ntBASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 AC140912.1-201ENST00000577171 1054 ntBASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 AP005019.2-201ENST00000615104 511 ntBASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC11.96□□□□□ -0.49
TTC9CQ8N5M4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
TTC9CQ8N5M4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
TTC9CQ8N5M4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TTC9CQ8N5M4 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC11.96□□□□□ -0.5
TTC9CQ8N5M4 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TTC9CQ8N5M4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC11.96□□□□□ -0.5
TTC9CQ8N5M4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TTC9CQ8N5M4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.96□□□□□ -0.5
TTC9CQ8N5M4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
TTC9CQ8N5M4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
TTC9CQ8N5M4 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
TTC9CQ8N5M4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
TTC9CQ8N5M4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 AL137783.1-201ENST00000623494 1896 ntBASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 AL162726.2-201ENST00000438986 1017 ntBASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 AC022616.1-201ENST00000518688 554 ntBASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms