Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 BEND3P1-201ENST00000421591 1944 ntBASIC13.7□□□□□ -0.22
SHFQ7M4L6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.7□□□□□ -0.22
SHFQ7M4L6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 LILRP1-201ENST00000444199 1370 ntBASIC13.7□□□□□ -0.22
SHFQ7M4L6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.7□□□□□ -0.22
SHFQ7M4L6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.7□□□□□ -0.22
SHFQ7M4L6 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SHFQ7M4L6 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHFQ7M4L6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHFQ7M4L6 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHFQ7M4L6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHFQ7M4L6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHFQ7M4L6 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHFQ7M4L6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHFQ7M4L6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 AC069262.1-201ENST00000539058 672 ntBASIC13.69□□□□□ -0.22
SHFQ7M4L6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHFQ7M4L6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHFQ7M4L6 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHFQ7M4L6 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.69□□□□□ -0.22
SHFQ7M4L6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHFQ7M4L6 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHFQ7M4L6 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHFQ7M4L6 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHFQ7M4L6 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHFQ7M4L6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHFQ7M4L6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHFQ7M4L6 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 AC089987.1-201ENST00000551654 2209 ntBASIC13.68□□□□□ -0.22
SHFQ7M4L6 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.68□□□□□ -0.22
SHFQ7M4L6 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 KRT18P43-201ENST00000469825 1281 ntBASIC13.68□□□□□ -0.22
SHFQ7M4L6 HLA-V-204ENST00000476601 1289 ntBASIC13.68□□□□□ -0.22
SHFQ7M4L6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SHFQ7M4L6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHFQ7M4L6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms