Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CICP8-201ENST00000455800 2813 ntBASIC13.27□□□□□ -0.28
C11orf88Q6PI97 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
C11orf88Q6PI97 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
C11orf88Q6PI97 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
C11orf88Q6PI97 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
C11orf88Q6PI97 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
C11orf88Q6PI97 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC13.27□□□□□ -0.28
C11orf88Q6PI97 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
C11orf88Q6PI97 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 FAM8A3P-201ENST00000427218 844 ntBASIC13.27□□□□□ -0.29
C11orf88Q6PI97 AL592309.1-201ENST00000443127 649 ntBASIC13.27□□□□□ -0.29
C11orf88Q6PI97 KRT18P34-201ENST00000488218 1270 ntBASIC13.27□□□□□ -0.29
C11orf88Q6PI97 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 IGHV3-62-201ENST00000520057 340 ntBASIC13.27□□□□□ -0.29
C11orf88Q6PI97 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 AL512356.2-201ENST00000546955 174 ntBASIC13.27□□□□□ -0.29
C11orf88Q6PI97 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 MIR4321-201ENST00000592276 80 ntBASIC13.27□□□□□ -0.29
C11orf88Q6PI97 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 AC099522.2-201ENST00000607001 744 ntBASIC13.27□□□□□ -0.29
C11orf88Q6PI97 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 REXO1L2P-201ENST00000425429 2069 ntBASIC13.27□□□□□ -0.29
C11orf88Q6PI97 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.27□□□□□ -0.29
C11orf88Q6PI97 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 HSPA7-201ENST00000445535 1927 ntBASIC13.26□□□□□ -0.29
C11orf88Q6PI97 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 AL805961.2-201ENST00000642139 4817 ntBASIC13.26□□□□□ -0.29
C11orf88Q6PI97 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 AC005562.1-201ENST00000583030 3219 ntBASIC13.26□□□□□ -0.29
C11orf88Q6PI97 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C11orf88Q6PI97 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms