Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TMEM53Q6P2H8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 AC092135.3-201ENST00000624151 1846 ntBASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 EEF1DP4-201ENST00000446006 880 ntBASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 IGHV3-42-201ENST00000520410 361 ntBASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 MIR6069-201ENST00000620069 79 ntBASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TMEM53Q6P2H8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 AOC4P-203ENST00000566825 2289 ntBASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 PMS2P2-201ENST00000425039 1128 ntBASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 AC027369.6-201ENST00000525520 931 ntBASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 AL158211.3-201ENST00000607385 239 ntBASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 MST1P2-201ENST00000457982 2291 ntBASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM53Q6P2H8 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms