Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 AC015922.1-201ENST00000421102 1152 ntBASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 AC008738.7-201ENST00000609744 511 ntBASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 AC004461.2-201ENST00000629517 803 ntBASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
ATPAF1Q5TC12 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 AC113367.3-201ENST00000508316 1912 ntBASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 MBLAC2-202ENST00000514906 1936 ntBASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms