Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 AC015922.1-201ENST00000421102 1152 ntBASIC16.64■□□□□ 0.25
TSR1Q2NL82 CNN2P11-201ENST00000429351 262 ntBASIC16.64■□□□□ 0.25
TSR1Q2NL82 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 AP000344.2-201ENST00000512987 629 ntBASIC16.64■□□□□ 0.25
TSR1Q2NL82 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 FP325330.2-201ENST00000624219 5630 ntBASIC16.64■□□□□ 0.25
TSR1Q2NL82 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 AC027601.5-201ENST00000624065 2482 ntBASIC16.64■□□□□ 0.25
TSR1Q2NL82 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.64■□□□□ 0.25
TSR1Q2NL82 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TSR1Q2NL82 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TSR1Q2NL82 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TSR1Q2NL82 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TSR1Q2NL82 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TSR1Q2NL82 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.63■□□□□ 0.25
TSR1Q2NL82 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TSR1Q2NL82 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TSR1Q2NL82 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TSR1Q2NL82 STRCP1-201ENST00000509801 5328 ntBASIC16.63■□□□□ 0.25
TSR1Q2NL82 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TSR1Q2NL82 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TSR1Q2NL82 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TSR1Q2NL82 AC104457.1-201ENST00000401024 814 ntBASIC16.63■□□□□ 0.25
TSR1Q2NL82 AC074338.1-201ENST00000416825 156 ntBASIC16.63■□□□□ 0.25
TSR1Q2NL82 SPDYE7P-202ENST00000420373 878 ntBASIC16.63■□□□□ 0.25
TSR1Q2NL82 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.63■□□□□ 0.25
TSR1Q2NL82 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.63■□□□□ 0.25
TSR1Q2NL82 KRT18P43-201ENST00000469825 1281 ntBASIC16.63■□□□□ 0.25
TSR1Q2NL82 AC026150.2-201ENST00000564693 1156 ntBASIC16.63■□□□□ 0.25
TSR1Q2NL82 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
TSR1Q2NL82 RN7SL440P-201ENST00000577855 343 ntBASIC16.63■□□□□ 0.25
TSR1Q2NL82 MIR4453-201ENST00000584019 89 ntBASIC16.63■□□□□ 0.25
TSR1Q2NL82 LINC00628-201ENST00000628516 1289 ntBASIC16.63■□□□□ 0.25
TSR1Q2NL82 AL513210.1-201ENST00000629608 234 ntBASIC16.63■□□□□ 0.25
TSR1Q2NL82 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TSR1Q2NL82 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC16.63■□□□□ 0.25
TSR1Q2NL82 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.63■□□□□ 0.25
TSR1Q2NL82 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TSR1Q2NL82 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TSR1Q2NL82 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TSR1Q2NL82 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TSR1Q2NL82 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TSR1Q2NL82 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TSR1Q2NL82 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TSR1Q2NL82 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TSR1Q2NL82 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TSR1Q2NL82 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.63■□□□□ 0.25
TSR1Q2NL82 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TSR1Q2NL82 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC16.62■□□□□ 0.25
TSR1Q2NL82 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TSR1Q2NL82 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TSR1Q2NL82 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TSR1Q2NL82 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TSR1Q2NL82 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms