Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IDH3AP50213 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IDH3AP50213 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IDH3AP50213 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IDH3AP50213 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IDH3AP50213 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IDH3AP50213 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.68□□□□□ -0.06
IDH3AP50213 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IDH3AP50213 HLA-K-203ENST00000430151 1046 ntBASIC14.68□□□□□ -0.06
IDH3AP50213 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.68□□□□□ -0.06
IDH3AP50213 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.68□□□□□ -0.06
IDH3AP50213 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
IDH3AP50213 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.68□□□□□ -0.06
IDH3AP50213 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IDH3AP50213 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.68□□□□□ -0.06
IDH3AP50213 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.68□□□□□ -0.06
IDH3AP50213 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
IDH3AP50213 AC120114.3-201ENST00000611923 658 ntBASIC14.68□□□□□ -0.06
IDH3AP50213 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.68□□□□□ -0.06
IDH3AP50213 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.68□□□□□ -0.06
IDH3AP50213 AL513210.1-201ENST00000629608 234 ntBASIC14.68□□□□□ -0.06
IDH3AP50213 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.68□□□□□ -0.06
IDH3AP50213 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IDH3AP50213 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
IDH3AP50213 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.68□□□□□ -0.06
IDH3AP50213 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IDH3AP50213 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.68□□□□□ -0.06
IDH3AP50213 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
IDH3AP50213 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
IDH3AP50213 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.68□□□□□ -0.06
IDH3AP50213 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
IDH3AP50213 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IDH3AP50213 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
IDH3AP50213 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.68□□□□□ -0.06
IDH3AP50213 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
IDH3AP50213 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IDH3AP50213 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.67□□□□□ -0.06
IDH3AP50213 DGCR9-201ENST00000609630 2415 ntBASIC14.67□□□□□ -0.06
IDH3AP50213 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.67□□□□□ -0.06
IDH3AP50213 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.67□□□□□ -0.06
IDH3AP50213 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 PPT1-213ENST00000641319 2388 ntBASIC14.67□□□□□ -0.06
IDH3AP50213 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
IDH3AP50213 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
IDH3AP50213 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
IDH3AP50213 AC004461.1-201ENST00000412461 403 ntBASIC14.67□□□□□ -0.06
IDH3AP50213 RPL37AP1-201ENST00000412502 279 ntBASIC14.67□□□□□ -0.06
IDH3AP50213 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.67□□□□□ -0.06
IDH3AP50213 AC004832.2-201ENST00000426397 482 ntBASIC14.67□□□□□ -0.06
IDH3AP50213 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 CEND1P1-201ENST00000451006 455 ntBASIC14.67□□□□□ -0.06
IDH3AP50213 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.67□□□□□ -0.06
IDH3AP50213 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.67□□□□□ -0.06
IDH3AP50213 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
IDH3AP50213 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.67□□□□□ -0.06
IDH3AP50213 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.67□□□□□ -0.06
IDH3AP50213 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.67□□□□□ -0.06
IDH3AP50213 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.67□□□□□ -0.06
IDH3AP50213 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.67□□□□□ -0.06
IDH3AP50213 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.67□□□□□ -0.06
IDH3AP50213 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.67□□□□□ -0.06
IDH3AP50213 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
IDH3AP50213 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 AC020910.6-201ENST00000623084 1459 ntBASIC14.67□□□□□ -0.06
IDH3AP50213 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.67□□□□□ -0.06
IDH3AP50213 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
IDH3AP50213 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
IDH3AP50213 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.67□□□□□ -0.06
IDH3AP50213 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
IDH3AP50213 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.67□□□□□ -0.06
IDH3AP50213 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IDH3AP50213 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms