Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CCND1P24385 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CCND1P24385 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.27■□□□□ 0.04
CCND1P24385 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.27■□□□□ 0.04
CCND1P24385 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.27■□□□□ 0.04
CCND1P24385 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.27■□□□□ 0.04
CCND1P24385 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.27■□□□□ 0.04
CCND1P24385 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.27■□□□□ 0.04
CCND1P24385 SLED1-202ENST00000512051 380 ntBASIC15.27■□□□□ 0.04
CCND1P24385 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.27■□□□□ 0.04
CCND1P24385 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.27■□□□□ 0.04
CCND1P24385 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.27■□□□□ 0.04
CCND1P24385 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.27■□□□□ 0.04
CCND1P24385 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.27■□□□□ 0.04
CCND1P24385 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.27■□□□□ 0.04
CCND1P24385 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
CCND1P24385 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCND1P24385 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.27■□□□□ 0.04
CCND1P24385 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.27■□□□□ 0.04
CCND1P24385 AC106028.4-201ENST00000614509 607 ntBASIC15.27■□□□□ 0.04
CCND1P24385 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.27■□□□□ 0.04
CCND1P24385 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCND1P24385 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CCND1P24385 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCND1P24385 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CCND1P24385 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCND1P24385 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCND1P24385 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.27■□□□□ 0.03
CCND1P24385 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCND1P24385 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.27■□□□□ 0.03
CCND1P24385 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCND1P24385 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCND1P24385 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CCND1P24385 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCND1P24385 BTBD7P1-201ENST00000447253 1453 ntBASIC15.27■□□□□ 0.03
CCND1P24385 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CCND1P24385 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCND1P24385 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCND1P24385 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.26■□□□□ 0.03
CCND1P24385 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.26■□□□□ 0.03
CCND1P24385 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.26■□□□□ 0.03
CCND1P24385 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.26■□□□□ 0.03
CCND1P24385 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.26■□□□□ 0.03
CCND1P24385 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.26■□□□□ 0.03
CCND1P24385 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.26■□□□□ 0.03
CCND1P24385 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.26■□□□□ 0.03
CCND1P24385 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.26■□□□□ 0.03
CCND1P24385 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.26■□□□□ 0.03
CCND1P24385 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.26■□□□□ 0.03
CCND1P24385 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCND1P24385 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.26■□□□□ 0.03
CCND1P24385 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCND1P24385 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.26■□□□□ 0.03
CCND1P24385 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCND1P24385 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCND1P24385 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCND1P24385 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.26■□□□□ 0.03
CCND1P24385 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CCND1P24385 HAL-202ENST00000538703 2637 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms